Click here to switch to the map view.

The map label for this gene is ywbD [H]

Identifier: 15926667

GI number: 15926667

Start: 1058737

End: 1059909

Strand: Direct

Name: ywbD [H]

Synonym: SA0932

Alternate gene names: 15926667

Gene position: 1058737-1059909 (Clockwise)

Preceding gene: 15926666

Following gene: 15926668

Centisome position: 37.61

GC content: 31.37

Gene sequence:

>1173_bases
ATGAAAATAGCAACTCTGAACAAAGGCAAAGAAACAAAATATTTTAATGGATATCCTTTAATTGAAGAAGAGGATATCTA
TTCACAAGATCATTTAAAAGAAGGAGATATTTTTCAAATTGTGACTGATAAATCACAATATGTTGCAACGGCTTATGTTG
GTCGCCAACATAAAGGATTAGGTTGGGTTCTAACATACGATAAAGCTCAAGAAATCAACACAGCTTTCTTTGTGAAATTG
TTTAATACTGCATTAGCAGAACGTGATTATTATTTTAATATAGATGGAACAAATGCTTTTAGATTATTTAATGCTGAAGG
TGATGGTGTTGGGGGATTAACAATCGACAATTACGATGGTCATTTGTTGATTCAATGGTACTCAAAAGGTATTTATAAAT
TTAAATATGCCATTCTTGAAGCGGTTAGAAAAGTATTTGATTATAAATCTATTTACGAAAAAGTAAGATTTAAAGACAGC
GAATATAGTGGTGGTTTTGTTGAAGGCGATGCACCTGAGTTTCCAATTGTTATCGAAGAAAACTTCACATTTTATAATGT
AGACCTTGAAGATGGTTTGATGACAGGTATCTTTTTAGATCAAAAAGAAGTGCGCAAGAAATTAAGGGGTCAATATGCCA
AAGAACGCCATGTTTTAAACTTATTTAGTTATACAGGTGCTTTTTCTGTAATAGCAGCAAGTGAGGCATCTTCAACAACA
AGTGTAGATTTGGCTAATCGTTCTCGTAGTTTAACTGAAGAAAATTTTGGATTAAATGCTATTGATCCTAAATCCCAATA
TATTTATGTCATGGACACTTTTGATTTCTATAAATATGCTGCACGACATGGACATAGTTATGACACGATCGTGATTGATC
CACCTAGCTTTGCACGCAACAAAAAACGTACATTTTCAGTGCAAAAAGATTATGACAAATTAATTAATGGCGCCTTAAAT
ATTTTATCATCTGAAGGAACATTATTGTTATGTACAAATGCAAGTGTATATCCATTAAAGCAATTTAAAAATACTATTAA
AAAGACGCTTGAAGAGAGTGGCGTTGATTATGAATTAACTGAAGTTATGGGTTTACCAAAAGATTTTAAAACGCATCCAC
ATTATAAGCCATCTAAATATTTAAAAGCTGTTTTTGTAAATATTAGACATTAA

Upstream 100 bases:

>100_bases
GTTAAAATCAACAGTAAGATTAGAAGTAGATGATATTGAAATTTGGCAAACAATTTAATCTATATAAAACTACAACGAAA
CACAGAAAGGAAGTTGTCAG

Downstream 100 bases:

>100_bases
TTTGATAAAAAGGGGTATAGTAACTTATTGAGAAAAAGAAGGGTGATAATATTATGGGATTCAAAAACAATTTAACATCA
AATTTAACAAATAAAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKL
FNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALN
ILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH

Sequences:

>Translated_390_residues
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKL
FNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALN
ILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
>Mature_390_residues
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGLGWVLTYDKAQEINTAFFVKL
FNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDS
EYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALN
ILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=391, Percent_Identity=27.6214833759591, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787181, Length=251, Percent_Identity=29.0836653386454, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 44739; Mature: 44739

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGL
CEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
GWVLTYDKAQEINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDG
EEEEEECCCHHCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEECCCC
HLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEE
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEC
NFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
CEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARN
EEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEECCCHHHCC
KKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELT
CCCEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHH
EVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
HHHCCCHHHCCCCCCCHHHHHEEHEEEECC
>Mature Secondary Structure
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGL
CEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
GWVLTYDKAQEINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDG
EEEEEECCCHHCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEECCCC
HLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEE
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEEEC
NFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASEASSTT
CEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
SVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARN
EEEECCCCCCCHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEECCCHHHCC
KKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELT
CCCEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHH
EVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
HHHCCCHHHCCCCCCCHHHHHEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]