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The map label for this gene is yvrB [H]

Identifier: 15926288

GI number: 15926288

Start: 661110

End: 662060

Strand: Direct

Name: yvrB [H]

Synonym: SA0567

Alternate gene names: 15926288

Gene position: 661110-662060 (Clockwise)

Preceding gene: 15926287

Following gene: 15926289

Centisome position: 23.49

GC content: 31.65

Gene sequence:

>951_bases
ATGACATTTAATAAAGTATTATTGAGCTGGATAGTCATATTGATTATAACAACTAGCATATATCTATTTTGGCAGTTGGG
GGATATCAATGATGTATTTAACCAGTCTATTTTAATCAATGTTAGATTACCGAGATTATTAGAAGCATTGTTGACAGGTA
TGATATTAACAGTTGCAGGTCTTATATTTCAAACAGTTTTAAATAATGCATTGGCAGATAGCTTTACATTAGGATTGGCA
AGCGGTGCTACATTTGGTTCAGGATTAGCATTATTTTTAGGTTTAACAACGTTATGGATTCCTGTATTTTCAATAACATT
TAGTTTGATAACATTAATAACTGTATTAGTCATTACGTCGGTATTGAGCCAAGGCTATCCAGTTAGAATCTTAATATTAA
GTGGTTTAATGATTGGTGCATTATTCAATTCACTTCTATATTTTTTGATTTTATTAAAACCTCGCAAATTAAATACAATT
GCCAATTATTTGTTTGGTGGCTTTGGTGATGCAGAATACTCAAATGTATCCATAATAGCAATCACATTTATCATTGCACT
GTTTGGTATATTTATCATTCTTAATCAACTAAAGTTATTGCAATTAGGAGAACTAAAAAGTCAGTCACTAGGCTTAAATG
TTCAATTGATTACATATATCGCGTTATGTATAGCTTCTATGATAACGGCGATAAATGTCGCATATGTTGGCATCATTGGA
TTCATTGGTATGGTGATACCACAACTCATTAGAAAATGGCAGTGGAAACAATCATTAGGAAGACAATTGGCTTTGAATAT
TGTAATTGGAGGACAAATAATGGTTATGGCAGATTTTATTGGTAGCCATATACTGTCACCAGTACAAATACCGGCAAGCA
TTATTATTGCATTAATTGGTATACCAGTGTTATTTTACATGCTAATATCTCAGTCGAAACGGTTACACTAG

Upstream 100 bases:

>100_bases
TGAGATAAGGGGTTTTTAAAATATATTTAGTGAATGATAGCAACGCGAGTATGTGATTGCTATAATGAATGTAATTATCG
ATGAAAGAAAAGAGAATGCT

Downstream 100 bases:

>100_bases
CACATGACATTTGCTAAAATAAAAATAACTATAAACATAAAGAGGGCATAAGCGATGGATTTGAATCAAATTAAAGCAGT
TGTATTTGATTTAGAAGGTA

Product: hypothetical protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLA
SGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTI
ANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIG
FIGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH

Sequences:

>Translated_316_residues
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLA
SGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTI
ANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIG
FIGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH
>Mature_315_residues
TFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLAS
GATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIA
NYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGF
IGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=289, Percent_Identity=30.1038062283737, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1786347, Length=279, Percent_Identity=27.9569892473118, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1788004, Length=228, Percent_Identity=28.0701754385965, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790741, Length=279, Percent_Identity=26.8817204301075, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786805, Length=286, Percent_Identity=28.3216783216783, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34618; Mature: 34486

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAG
CCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHH
LIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIA
HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHH
ITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIG
HHHHHHHHHHHHHHHHHHHCHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IPVLFYMLISQSKRLH
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAG
CHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHH
LIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIA
HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHH
ITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIGMVIPQLIRKWQWKQSLGRQLALNIVIGGQIMVMADFIGSHILSPVQIPASIIIALIG
HHHHHHHHHHHHHHHHHHHCHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IPVLFYMLISQSKRLH
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]