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The map label for this gene is tadA [H]

Identifier: 15926236

GI number: 15926236

Start: 602712

End: 603182

Strand: Direct

Name: tadA [H]

Synonym: SA0516

Alternate gene names: 15926236

Gene position: 602712-603182 (Clockwise)

Preceding gene: 15926233

Following gene: 15926237

Centisome position: 21.41

GC content: 36.31

Gene sequence:

>471_bases
ATGACAAATGATATATATTTTATGACATTAGCGATTGAAGAAGCTAAAAAAGCAGCTCAACTAGGCGAAGTACCTATAGG
TGCTATCATCACTAAAGATGATGAAGTTATCGCTAGAGCACATAATTTAAGAGAAACACTACAACAACCAACGGCGCATG
CTGAACATATTGCAATTGAACGTGCAGCCAAAGTGTTAGGTAGTTGGCGTTTAGAAGGTTGCACATTATATGTAACCTTA
GAACCATGTGTCATGTGCGCAGGAACAATTGTAATGAGTCGCATTCCAAGAGTCGTCTATGGCGCAGATGATCCTAAAGG
TGGTTGTAGTGGCAGTTTAATGAATTTATTGCAACAATCTAATTTTAATCATCGTGCAATTGTTGATAAAGGTGTACTTA
AAGAAGCATGTAGCACATTATTAACAACATTTTTTAAAAACTTAAGAGCCAATAAGAAATCCACCAATTAG

Upstream 100 bases:

>100_bases
TAGGACCTTCAATTGCTATAAAAGGTTTGTTCATATTCACATCTCCAAATGTTAAAATAGACATTGAGTATTGTACCATA
AGTGAGGTATCTGGACATAA

Downstream 100 bases:

>100_bases
ACGATAGTACATACTAATTAAAATTTGTTAGAATTACATTATATGATAAATTAATGACAATATAAATGTTAATAGAAAAG
TATGTGCGCTGAGTATATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTL
EPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN

Sequences:

>Translated_156_residues
MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTL
EPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN
>Mature_155_residues
TNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLE
PCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=153, Percent_Identity=32.0261437908497, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI145693172, Length=155, Percent_Identity=43.2258064516129, Blast_Score=135, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17554608, Length=97, Percent_Identity=46.3917525773196, Blast_Score=92, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17541138, Length=148, Percent_Identity=32.4324324324324, Blast_Score=77, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17555996, Length=97, Percent_Identity=37.1134020618557, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6325319, Length=98, Percent_Identity=40.8163265306122, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355527, Length=147, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17090; Mature: 16959

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE
CCCCEEEEEEEHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHH
RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS
HHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHC
NFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE
CCCEEEEEEEHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHH
RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS
HHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHC
NFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1698458; 7584024; 9384377 [H]