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The map label for this gene is metS

Identifier: 15926167

GI number: 15926167

Start: 519188

End: 521161

Strand: Direct

Name: metS

Synonym: SA0448

Alternate gene names: 15926167

Gene position: 519188-521161 (Clockwise)

Preceding gene: 15926166

Following gene: 15926168

Centisome position: 18.44

GC content: 34.04

Gene sequence:

>1974_bases
ATGGCTAAAGAAACATTTTATATAACAACCCCAATATACTATCCTAGTGGGAATTTACATATAGGACATGCATATTCTAC
AGTGGCTGGAGATGTTATTGCAAGATATAAGAGAATGCAAGGATATGATGTTCGTTATTTGACTGGAACGGATGAACACG
GTCAAAAAATTCAAGAAAAAGCTCAAAAAGCTGGTAAGACAGAAATTGAATATTTGGATGAGATGATTGCTGGAATTAAA
CAATTGTGGGCTAAGCTTGAAATTTCAAATGATGATTTTATCAGAACAACTGAAGAACGTCATAAACATGTCGTTGAGCA
AGTGTTTGAACGTTTATTAAAGCAAGGTGATATCTATTTAGGTGAATATGAAGGTTGGTATTCTGTTCCGGATGAAACAT
ACTATACAGAGTCACAATTAGTAGACCCACAATACGAAAACGGTAAAATTATTGGTGGCAAAAGTCCAGATTCTGGACAC
GAAGTTGAACTAGTTAAAGAAGAAAGTTATTTCTTTAATATTAGTAAATATACAGACCGTTTATTAGAGTTCTATGACCA
AAATCCAGATTTTATACAACCACCATCAAGAAAAAATGAAATGATTAACAACTTCATTAAACCAGGACTTGCTGATTTAG
CTGTTTCTCGTACATCATTTAACTGGGGTGTCCATGTTCCGTCTAATCCAAAACATGTTGTTTATGTTTGGATTGATGCG
TTAGTTAACTATATTTCAGCATTAGGCTATTTATCAGATGATGAGTCACTATTTAACAAATACTGGCCAGCAGATATTCA
TTTAATGGCTAAGGAAATTGTGCGATTCCACTCAATTATTTGGCCTATTTTATTGATGGCATTAGACTTACCGTTACCTA
AAAAAGTCTTTGCACATGGTTGGATTTTGATGAAAGATGGAAAAATGAGTAAATCTAAAGGTAATGTTGTAGACCCTAAT
ATTTTAATTGATCGCTATGGTTTAGATGCTACACGTTATTATCTAATGCGTGAATTACCATTTGGTTCAGATGGCGTATT
TACACCTGAAGCATTTGTTGAGCGTACAAATTTCGATCTAGCAAATGACTTAGGTAACTTAGTAAACCGTACGATTTCTA
TGGTTAATAAGTACTTTGATGGCGAATTACCAGCGTATCAAGGTCCACTTCATGAATTAGATGAAGAAATGGAAGCTATG
GCTTTAGAAACAGTGAAAAGCTACACTGAAAGCATGGAAAGTTTGCAATTTTCTGTGGCATTATCTACGGTATGGAAGTT
TATAAGTAGAACGAATAAGTATATTGACGAAACAACGCCTTGGGTATTAGCTAAGGACGATAGCCAAAAAGATATGTTAG
GCAATGTAATGGCTCACTTAGTTGAAAATATTCGTTATGCAGCTGTATTATTACGTCCATTCTTAACACATGCGCCGAAA
GAGATTTTTGAACAATTGAACATAAACAATCCTCAATTTATGGAATTTAGTAGTTTAGAGCAATATGGTGTGCTTACTGA
GTCAATTATGGTTACTGGGCAACCTAAACCTATTTTCCCAAGATTGGATAGCGAAGCGGAAATTGCATATATCAAAGAAT
CAATGCAACCGCCTGCTACTGAAGAGGAAAAAGAAGAGATTCCTAGCAAACCTCAAATTGATATTAAAGACTTTGATAAA
GTTGAAATTAAGGCAGCAACGATTATTGATGCTGAACATGTTAAGAAGTCAGATAAGCTTTTAAAAATTCAAGTAGACTT
AGATTCTGAACAAAGACAAATTGTATCAGGAATTGCCAAATTCTATACACCAGATGATATTATTGGTAAAAAAGTAGCAG
TTGTTACTAACCTGAAACCAGCTAAATTAATGGGACAAAAATCTGAAGGTATGATATTATCTGCTGAAAAAGATGGTGTA
TTAACCTTAGTAAGTTTACCAAGTGCAATTCCAAATGGTGCAGTGATTAAATAA

Upstream 100 bases:

>100_bases
TAAGATGAAAATGAGATGACGAGATAAATGTTCGCGTCCGTTGAAATGCATAGAAATCTTAGATATTATTTGAAGTGAGA
CATTACGAGGAGGAACAGTT

Downstream 100 bases:

>100_bases
CTGTATTTTTAAAAATTAGGAGAGATAATTATGTTAATCGATACACATGTCCATTTAAATGATGAGCAATACGATGATGA
TTTGAGTGAAGTGATTACAC

Product: methionyl-tRNA synthetase

Products: NA

Alternate protein names: Methionine--tRNA ligase; MetRS [H]

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTEIEYLDEMIAGIK
QLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGH
EVELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDA
LVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPN
ILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAM
ALETVKSYTESMESLQFSVALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPK
EIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPPATEEEKEEIPSKPQIDIKDFDK
VEIKAATIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAKFYTPDDIIGKKVAVVTNLKPAKLMGQKSEGMILSAEKDGV
LTLVSLPSAIPNGAVIK

Sequences:

>Translated_657_residues
MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTEIEYLDEMIAGIK
QLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGH
EVELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDA
LVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPN
ILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAM
ALETVKSYTESMESLQFSVALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPK
EIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPPATEEEKEEIPSKPQIDIKDFDK
VEIKAATIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAKFYTPDDIIGKKVAVVTNLKPAKLMGQKSEGMILSAEKDGV
LTLVSLPSAIPNGAVIK
>Mature_656_residues
AKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTEIEYLDEMIAGIKQ
LWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHE
VELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDAL
VNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNI
LIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMA
LETVKSYTESMESLQFSVALSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKE
IFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPPATEEEKEEIPSKPQIDIKDFDKV
EIKAATIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAKFYTPDDIIGKKVAVVTNLKPAKLMGQKSEGMILSAEKDGVL
TLVSLPSAIPNGAVIK

Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]

COG id: COG0143

COG function: function code J; Methionyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI24308436, Length=549, Percent_Identity=32.6047358834244, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI14043022, Length=518, Percent_Identity=26.6409266409266, Blast_Score=150, Evalue=3e-36,
Organism=Escherichia coli, GI1788432, Length=678, Percent_Identity=27.8761061946903, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1789455, Length=82, Percent_Identity=35.3658536585366, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1786861, Length=202, Percent_Identity=27.7227722772277, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212645096, Length=509, Percent_Identity=30.0589390962672, Blast_Score=248, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI71992781, Length=399, Percent_Identity=28.3208020050125, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17540794, Length=630, Percent_Identity=25.2380952380952, Blast_Score=156, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6321610, Length=523, Percent_Identity=31.5487571701721, Blast_Score=265, Evalue=2e-71,
Organism=Saccharomyces cerevisiae, GI6321704, Length=472, Percent_Identity=24.5762711864407, Blast_Score=120, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6323414, Length=203, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21358483, Length=562, Percent_Identity=31.4946619217082, Blast_Score=272, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24655311, Length=561, Percent_Identity=26.5597147950089, Blast_Score=161, Evalue=1e-39,

Paralogues:

None

Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR015413
- InterPro:   IPR004495
- InterPro:   IPR014758
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR014729
- InterPro:   IPR002547
- InterPro:   IPR009080
- InterPro:   IPR013155 [H]

Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]

EC number: =6.1.1.10 [H]

Molecular weight: Translated: 74874; Mature: 74743

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50886 TRBD ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEK
CCCCEEEEECCEEECCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
AQKAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYL
HHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEE
GEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDR
ECCCCEECCCCCCEECHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEHHHHHHH
LLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDA
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCCCEEECCCCCCEEEEEEHHH
LVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHG
HHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
WILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDL
EEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCH
ANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPK
HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
EIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPPAT
HHHHHCCCCCCCCEEHHHHHHHCCHHHHEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCC
EEEKEEIPSKPQIDIKDFDKVEIKAATIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAK
CHHHHHCCCCCCCCCCCCCCEEEEEEEEECHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
FYTPDDIIGKKVAVVTNLKPAKLMGQKSEGMILSAEKDGVLTLVSLPSAIPNGAVIK
HCCCHHHHCCEEEEEECCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEK
CCCEEEEECCEEECCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
AQKAGKTEIEYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYL
HHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEE
GEYEGWYSVPDETYYTESQLVDPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDR
ECCCCEECCCCCCEECHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEHHHHHHH
LLEFYDQNPDFIQPPSRKNEMINNFIKPGLADLAVSRTSFNWGVHVPSNPKHVVYVWIDA
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHEECCCCCCEEECCCCCCEEEEEEHHH
LVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIWPILLMALDLPLPKKVFAHG
HHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
WILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDL
EEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCH
ANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPK
HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
EIFEQLNINNPQFMEFSSLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPPAT
HHHHHCCCCCCCCEEHHHHHHHCCHHHHEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCC
EEEKEEIPSKPQIDIKDFDKVEIKAATIIDAEHVKKSDKLLKIQVDLDSEQRQIVSGIAK
CHHHHHCCCCCCCCCCCCCCEEEEEEEEECHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
FYTPDDIIGKKVAVVTNLKPAKLMGQKSEGMILSAEKDGVLTLVSLPSAIPNGAVIK
HCCCHHHHCCEEEEEECCCHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA