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The map label for this gene is ssb

Identifier: 15926067

GI number: 15926067

Start: 412192

End: 412695

Strand: Direct

Name: ssb

Synonym: SA0353

Alternate gene names: 15926067

Gene position: 412192-412695 (Clockwise)

Preceding gene: 15926066

Following gene: 15926068

Centisome position: 14.64

GC content: 38.29

Gene sequence:

>504_bases
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Upstream 100 bases:

>100_bases
CTGACGAATTCCAACGTCTAGCTAAAATCAGTGACGATATCATTCGTTACATGGTTATTCGTGAAGACGAAGACAAGTAA
TAATTAGAGGGGGCGTTTAA

Downstream 100 bases:

>100_bases
TAAAAATTAACGAAATTAAAGCGGAAAAATTATCAAAGGAGGCACACAATCATGGCAGGTGGACCAAGAAGAGGCGGACG
TCGTCGTAAAAAAGTATGCT

Product: single-strand DNA-binding protein of phage phi PVL

Products: NA

Alternate protein names: SSB 2; Helix-destabilizing protein 2

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Sequences:

>Translated_167_residues
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
>Mature_167_residues
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=173, Percent_Identity=32.3699421965318, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB2_STAAS (Q6GCA6)

Other databases:

- EMBL:   BX571857
- RefSeq:   YP_042467.1
- ProteinModelPortal:   Q6GCA6
- SMR:   Q6GCA6
- STRING:   Q6GCA6
- EnsemblBacteria:   EBSTAT00000023516
- GeneID:   2863484
- GenomeReviews:   BX571857_GR
- KEGG:   sas:SAS0342
- eggNOG:   COG0629
- GeneTree:   EBGT00050000024614
- HOGENOM:   HBG755544
- OMA:   MQQNAGY
- ProtClustDB:   CLSK884591
- BioCyc:   SAUR282459:SAS0342-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 18539; Mature: 18539

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADN
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECEECCCCCCCCHHHEEEEEEECCCCC
VNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEF
HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDISDDDLPF
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADN
CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECEECCCCCCCCHHHEEEEEEECCCCC
VNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEF
HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDISDDDLPF
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA