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The map label for this gene is 15925479

Identifier: 15925479

GI number: 15925479

Start: 2624332

End: 2625663

Strand: Reverse

Name: 15925479

Synonym: SAV2489

Alternate gene names: NA

Gene position: 2625663-2624332 (Counterclockwise)

Preceding gene: 15925480

Following gene: 15925478

Centisome position: 91.22

GC content: 28.98

Gene sequence:

>1332_bases
ATGAGTAGATTACTAAATGATTTCAATCAATCTTTAAAAAAAGGTTTTATAGACAAAGATATTTCTCATAAAGGGAATTA
TACACCGAAGCTTTTAGTAAATAATAAAAATGAAAAAGTCCTTTCAACAATTATAGATGAACTTCAAAAATGTGAAACGT
TCTATTTTTCTGTAGCTTTTATAACAGAAAGCGGATTAGCCAGCTTAAAGGCTCAACTATTAGATTTAAGCAATAAGGGT
GTTAAAGGGAAAATATTAACATCTAATTACTTAGGATTTAATAGTCCTAAAATGTATGGAGAATTACTTAAATTAAAAAA
TGTAGAGGTAAGATTAACTGATATTGCTGGATTCCATGCCAAAGGATATATTTTTGAACATAAGGATTATAGTTCTATGG
TAATAGGAAGCTCTAATTTAACATCTAATGCGTTAAAGGTTAATTATGAGCATAATGTTTTACTGTCTACTATGAAAAAT
GGTGATTTAGTTGATAGTGTAAAAAATGAATTTGAATTGTTATGGCAAAAGAGTACCCCACTGACTGAGCAATGGATTAA
TTCATATAAAGAATCATTTGAGTACCGTTCCTTAGAAAAATTAGCGGAGGTTGAACAAACTCAAATGCTGCTAGCTGATA
AGGTGAAAAAATCAGTGGAAATTGTACCCAATTTAATGCAAGCAGAAGCATTAAGGTCATTAAAAGCTATTAGGGATAAA
ACCAAAGATAAGGCGTTAATAATATCTGCAACTGGTACAGGTAAAACGATTTTATGTGCATTAGATGTTAGAGAAGTAAA
CCCTAATAAATTTTTATTTATTGTTCATAATGAGGGGATTTTAAATAGAGCTAAGGAAGAATTTAAAAAAGTATTACCTA
TAAAAAATGATAGTGATTTTGGATTGTTGACAGGAAAACATAGAGATGTCGATGCCAAATATTTATTTGCAACCATTCAA
ACATTATCTAGAGATGATAATTTTAAGCAATTTGATGAAAATGAATTTGATTATATTGTTTTTGATGAAGCACATCGTTC
TGCTGCATCTACTTATCAACGAGTATTTAACTACTTCAAACCTAAGTTCATGCTGGGAATGACTGCTACACCAGAAAGAT
CAGATGAATTAAGTATATTTGAACTGTTTGATTATAATATTGCATATGAAATAAGGTTACAAGCAGCGTTAGAAAGTGAT
ATTTTATGTCCATTTCATTATTTTGGTGTGACTGATTATGTACATCAAGGTATTAAAGAAGATGATGTAACTAAACTGAG
ATATTTAACTTCTGATGAAAGAGTTAATTATATTATTCAAAAGACAGATTAA

Upstream 100 bases:

>100_bases
CATAAGAGTATTGAATGGTTGTCAATAAACGAACTTGATAAATTAAATTGGGCCCCAGCGGATATACCAGCCGTTAATAA
AATTATGACTGAGGGATAAT

Downstream 100 bases:

>100_bases
TATGGATATTCAGGTGAAATTTTACAAGGATTAATTTTTGTGAGTAGCAAAAAAGAAGCTTATGATTTAGCGGATAAACT
AAGTTCAAAAGGGATTAAAA

Product: putative helicase (truncated)

Products: NA

Alternate protein names: Helicase; Type III Restriction Res Subunit; DNA/RNA Helicase; Type I Restriction- System R Subunit; Superfamily II DNA/RNA Helicase; ATP-Dependent Helicase; Phage DEAD Box Family Helicase; Type I Site-Specific Deoxyribonuclease; DEAD/DEAH Family Helicase; Helicase-Related Protein; DNA Repair Helicase Rad; Type I Restriction R Protein; Restriction- System Endonuclease; Type III Restriction; Type III Restriction Res Subunit Family; DEAD/DEAH Box Helicase-Like; Type III Restriction Protein; II DNA/RNA Helicase; ATP-Dependent RNA Helicase; DEAD Box Family Helicase; Type I Site-Specific Deoxyribonuclease Protein R; Transposase IS4 Family Protein; Type I Restriction- Endonuclease Subunit R; Phage Related Helicase; Restriction/Helicase Domain-Containing Protein; DNA Or RNA Helicases Of Superfamily II; Carboxylic Ester Hydrolase; DEAD/DEAH Box Family Helicase; DNA Repair DNA/RNA Helicase; Type I Site-Specific Restriction- System R Subunit; DEAD/DEAH Box Helicase Domain-Containing Protein; HKD Family Nuclease/DNA/RNA Helicase; Type I Restriction- System R Protein; DNA/RNA Helicase Superfamily II Protein; Type I Restriction- System Restriction Subunit; LOW QUALITY PROTEIN HKD Family Nuclease/DNA/RNA Helicase; Type I Restriction R Subunit; Helicase Domain-Containing Protein; DEAD/DEAH Box Helicase; DEAD/DEAH Box Helicase N-Terminal; DNA/RNA Helicase Superfamily II; Type III Restriction Subunit Res

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MSRLLNDFNQSLKKGFIDKDISHKGNYTPKLLVNNKNEKVLSTIIDELQKCETFYFSVAFITESGLASLKAQLLDLSNKG
VKGKILTSNYLGFNSPKMYGELLKLKNVEVRLTDIAGFHAKGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKN
GDLVDSVKNEFELLWQKSTPLTEQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKSVEIVPNLMQAEALRSLKAIRDK
TKDKALIISATGTGKTILCALDVREVNPNKFLFIVHNEGILNRAKEEFKKVLPIKNDSDFGLLTGKHRDVDAKYLFATIQ
TLSRDDNFKQFDENEFDYIVFDEAHRSAASTYQRVFNYFKPKFMLGMTATPERSDELSIFELFDYNIAYEIRLQAALESD
ILCPFHYFGVTDYVHQGIKEDDVTKLRYLTSDERVNYIIQKTD

Sequences:

>Translated_443_residues
MSRLLNDFNQSLKKGFIDKDISHKGNYTPKLLVNNKNEKVLSTIIDELQKCETFYFSVAFITESGLASLKAQLLDLSNKG
VKGKILTSNYLGFNSPKMYGELLKLKNVEVRLTDIAGFHAKGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKN
GDLVDSVKNEFELLWQKSTPLTEQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKSVEIVPNLMQAEALRSLKAIRDK
TKDKALIISATGTGKTILCALDVREVNPNKFLFIVHNEGILNRAKEEFKKVLPIKNDSDFGLLTGKHRDVDAKYLFATIQ
TLSRDDNFKQFDENEFDYIVFDEAHRSAASTYQRVFNYFKPKFMLGMTATPERSDELSIFELFDYNIAYEIRLQAALESD
ILCPFHYFGVTDYVHQGIKEDDVTKLRYLTSDERVNYIIQKTD
>Mature_442_residues
SRLLNDFNQSLKKGFIDKDISHKGNYTPKLLVNNKNEKVLSTIIDELQKCETFYFSVAFITESGLASLKAQLLDLSNKGV
KGKILTSNYLGFNSPKMYGELLKLKNVEVRLTDIAGFHAKGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKNG
DLVDSVKNEFELLWQKSTPLTEQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKSVEIVPNLMQAEALRSLKAIRDKT
KDKALIISATGTGKTILCALDVREVNPNKFLFIVHNEGILNRAKEEFKKVLPIKNDSDFGLLTGKHRDVDAKYLFATIQT
LSRDDNFKQFDENEFDYIVFDEAHRSAASTYQRVFNYFKPKFMLGMTATPERSDELSIFELFDYNIAYEIRLQAALESDI
LCPFHYFGVTDYVHQGIKEDDVTKLRYLTSDERVNYIIQKTD

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320539, Length=257, Percent_Identity=25.6809338521401, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50849; Mature: 50717

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLNDFNQSLKKGFIDKDISHKGNYTPKLLVNNKNEKVLSTIIDELQKCETFYFSVAF
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEEE
ITESGLASLKAQLLDLSNKGVKGKILTSNYLGFNSPKMYGELLKLKNVEVRLTDIAGFHA
EECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC
KGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKNGDLVDSVKNEFELLWQKSTP
CCEEEECCCCCEEEEECCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
LTEQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKSVEIVPNLMQAEALRSLKAIRDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKDKALIISATGTGKTILCALDVREVNPNKFLFIVHNEGILNRAKEEFKKVLPIKNDSDF
CCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
GLLTGKHRDVDAKYLFATIQTLSRDDNFKQFDENEFDYIVFDEAHRSAASTYQRVFNYFK
EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCC
PKFMLGMTATPERSDELSIFELFDYNIAYEIRLQAALESDILCPFHYFGVTDYVHQGIKE
CEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEHHCCCCCCCHHHHCHHHHHHCCCCC
DDVTKLRYLTSDERVNYIIQKTD
CCCHHHHEECCCCCEEEEEEECC
>Mature Secondary Structure 
SRLLNDFNQSLKKGFIDKDISHKGNYTPKLLVNNKNEKVLSTIIDELQKCETFYFSVAF
CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEEE
ITESGLASLKAQLLDLSNKGVKGKILTSNYLGFNSPKMYGELLKLKNVEVRLTDIAGFHA
EECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC
KGYIFEHKDYSSMVIGSSNLTSNALKVNYEHNVLLSTMKNGDLVDSVKNEFELLWQKSTP
CCEEEECCCCCEEEEECCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
LTEQWINSYKESFEYRSLEKLAEVEQTQMLLADKVKKSVEIVPNLMQAEALRSLKAIRDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKDKALIISATGTGKTILCALDVREVNPNKFLFIVHNEGILNRAKEEFKKVLPIKNDSDF
CCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCC
GLLTGKHRDVDAKYLFATIQTLSRDDNFKQFDENEFDYIVFDEAHRSAASTYQRVFNYFK
EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCC
PKFMLGMTATPERSDELSIFELFDYNIAYEIRLQAALESDILCPFHYFGVTDYVHQGIKE
CEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEHHCCCCCCCHHHHCHHHHHHCCCCC
DDVTKLRYLTSDERVNYIIQKTD
CCCHHHHEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA