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The map label for this gene is 15925425

Identifier: 15925425

GI number: 15925425

Start: 2566834

End: 2567307

Strand: Reverse

Name: 15925425

Synonym: SAV2435

Alternate gene names: NA

Gene position: 2567307-2566834 (Counterclockwise)

Preceding gene: 15925427

Following gene: 15925421

Centisome position: 89.19

GC content: 36.29

Gene sequence:

>474_bases
ATGGAATATCAATTACAACAACTTGCGTCGTTAACGTTAGTAGGTATTAAAGAAACGTATGAAAATGGACGACAGGCTCA
GCAACATATAGCCGGGTTTTGGCAAAGGTGTTATCAAGAGGGAGTAATTGCGGATTTACAGTTAAAAAATAATGGTGATT
TAGCCGGGATACTTGGCTTATGTATACCCGAATTAGACGGTAAGATGTCATATATGATTGCAGTTACCGGAGATAATAGT
GCTGATATTGCAAAATATGATGTCATAACATTAGCAAGTTCAAAGTATATGGTATTTGAAGCACAGGGCGCAGTACCTAA
AGCAGTTCAACAAAAAATGGAAGAGGTTCATCACTACATACATCAATATCAAGCAAATACGGTAAAATCAGCACCATTTT
TTGAGTTGTATCAGGATGGTGATACTACAAGTGAAAAATATATTACAGAAATTTGGATGCCTGTTAAAGGGTGA

Upstream 100 bases:

>100_bases
GCATTGATTCAATAAATATTTAATATAATTATATAGCGTCAATGCAAAATGTCCTAAACATATGTTTTACATGAGTGAAT
AAAATTAATGGAGTGATAAA

Downstream 100 bases:

>100_bases
TTGAATAGAAATGTACTTGATATGAAGGCGTAATTTTAGTTGAAGATTGGATTTCATAATTCATAAAGAAGAACCCCGAC
AAAGATAGATATCTTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Activator; AraC/XylS Family Transcriptional Regulator; Positive Transcriptional Activator; Transcription Activator

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGLCIPELDGKMSYMIAVTGDNS
ADIAKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYIHQYQANTVKSAPFFELYQDGDTTSEKYITEIWMPVKG

Sequences:

>Translated_157_residues
MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGLCIPELDGKMSYMIAVTGDNS
ADIAKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYIHQYQANTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
>Mature_157_residues
MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGLCIPELDGKMSYMIAVTGDNS
ADIAKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYIHQYQANTVKSAPFFELYQDGDTTSEKYITEIWMPVKG

Specific function: Unknown

COG id: COG3708

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17661; Mature: 17661

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGL
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
CIPELDGKMSYMIAVTGDNSADIAKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYI
HHHCCCCCEEEEEEEECCCCCCHHHEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHH
HQYQANTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
HHHHCCCCCCCCHHHEECCCCCCHHHHHHHHEEECCC
>Mature Secondary Structure
MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGL
CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
CIPELDGKMSYMIAVTGDNSADIAKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYI
HHHCCCCCEEEEEEEECCCCCCHHHEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHH
HQYQANTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
HHHHCCCCCCCCHHHEECCCCCCHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA