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The map label for this gene is tcaA

Identifier: 15925346

GI number: 15925346

Start: 2481087

End: 2482469

Strand: Reverse

Name: tcaA

Synonym: SAV2356

Alternate gene names: 15925346

Gene position: 2482469-2481087 (Counterclockwise)

Preceding gene: 15925347

Following gene: 15925345

Centisome position: 86.24

GC content: 31.67

Gene sequence:

>1383_bases
ATGAAATCTTGCCCGAAGTGCGGACAACAAGCACAAGATGATGTACAGATATGTACACAATGTGGACATAAATTTGATAG
TCGTCAAGCATTATATAGAAAGTCAACCGATGAAGATATACAAACTAATAACATCAAGATGAGAAAAATGGTGCCTTGGG
CAATTGGTTTTTTCATTTTAATCTTAATTATTATATTGTTCTTTTTACTAAGAAACTTCAATTCACCTGAAGCGCAAACT
AAAATATTAGTGAATGCGATTGAGAATAATGATAAACAAAAAGTAGCAACATTATTAAGTACTAAAGATAATAAAGTAGA
TTCTGAAGAAGCGAAAGTATACATTAACTATATCAAAGATGAAGTTGGGCTTAAGCAATTTGTCAGCGACCTTAAAAATA
CGGTACATAAATTGAATAAGAGTAAGACCAGCGTAGCTTCTTATATTCAAACCAGATCTGGTCAAAATATATTACGTGTA
AGTAAAAATGGCACGCGTTATATCTTTTTCGATAATATGAGCTTTACTGCACCTACCAAGCAACCAATTGTTAAGCCGAA
AGAAAAAACAAAATATGAGTTTAAATCTGGTGGTAAGAAAAAGATGGTTATAGCTGAAGCAAATAAAGTGACGCCAATAG
GTAATTTTATACTGGGGACATATAGAATTCCAGCTATGAAATCAACTGAGAACGGTGATTTTGCAGGCTATTTAAAATTT
GATTTTAGACAAAGTAATTCTGAAACGGTAGATGTTACTGAAGATTTTGAAGAAGCAAATATAACTGTAACTTTAAAAGG
CGATACAAAATTAAATGATAGTTCTAAAAAAGTAACTATAAATGACCGTGAAATGGCATTTTCAAGTTCCAAAACGTATG
GTCCATATCCACAAAATAAAGATATTACCATTTCAGCTTCAGGTAAAGCGAAAGGTAAAACATTTACAACACAGACGAAG
ACGATTAAAGCCAGCGATTTAAAATACAATACAGAGATAACTTTGAATTTTGACAGTGAAGATATCGAAGACTATGTTGA
AAAGAAAGAAAAAGAAGAAAACAGCTTGAAGAACAAATTGATAGAATTCTTTGCTGGATATTCTTTAGCGAATAATGCTG
CGTTTAATCAGTCAGATTTTGATTTTGTATCGTCATATATAAAAAAAGGATCATCTTTTTATGATGATGTAAAGAAGCGT
GTATCTAAAGGAAGTTTAATGATGATTAGTTCACCACAAATTATAGATGCTGAAAAACATGGTGATAAGATTACCGCAAC
CGTAAGATTAATAAATGAAAACGGTAAGCAAGTAGATAAAGAATATGAGCTTGAACAAGGCTCGCAAGACCGCTTGCAAT
TAATCAAGACATCAGAAAAATAG

Upstream 100 bases:

>100_bases
TTCTTGGGATAATATTTGTAAAATAATAATGGTAAAATAATGAAATAATTTTTGTGATATACATATAACAATTGAAGAGG
AACAGAATTGAGGTGAAAGT

Downstream 100 bases:

>100_bases
AGTATAAAACTTAAATAAGATGCATGTGTCATGGAATACAAACAACATCCTTTCAAAGTATTTACAATTAGTGTGAATTA
CTTTGAAGGGATTGTTTTTT

Product: TcaA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFILGTYRIPAMKSTENGDFAGYLKF
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK

Sequences:

>Translated_460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFILGTYRIPAMKSTENGDFAGYLKF
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
>Mature_460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFILGTYRIPAMKSTENGDFAGYLKF
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK

Specific function: Unknown

COG id: COG4640

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tcaA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TCAA_STAA1 (A7X5X6)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442930.1
- STRING:   A7X5X6
- EnsemblBacteria:   EBSTAT00000003698
- GeneID:   5560947
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2340
- eggNOG:   COG4640
- GeneTree:   EBGT00050000023727
- HOGENOM:   HBG693178
- OMA:   ENDATVF
- ProtClustDB:   CLSK885921
- BioCyc:   SAUR418127:SAHV_2340-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52132; Mature: 52132

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1036b61c)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH
ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH
EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC
QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFILGTYRIPAMKSTENGDFAGYLKF
CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEE
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNK
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCC
DITISASGKAKGKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
CEEEEECCCCCCCEEEEECCEEEECCEEECEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC
GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCH
>Mature Secondary Structure
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHH
ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH
EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC
QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFILGTYRIPAMKSTENGDFAGYLKF
CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEE
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNK
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCC
DITISASGKAKGKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
CEEEEECCCCCCCEEEEECCEEEECCEEECEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC
GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA