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The map label for this gene is truncated-mapW

Identifier: 15924927

GI number: 15924927

Start: 2080823

End: 2081143

Strand: Reverse

Name: truncated-mapW

Synonym: SAV1937

Alternate gene names: NA

Gene position: 2081143-2080823 (Counterclockwise)

Preceding gene: 15924928

Following gene: 15924925

Centisome position: 72.3

GC content: 25.23

Gene sequence:

>321_bases
ATCAAAAAAAAAATAAATAAATCTAATAATGTGAAATTCCCAGTAACAATAAATAAATTTGAAAACATAGTTTCAAATGA
ATTTGTGTTCTATAATGCAAGCAAAATTACAATTAATGATTTAAGTATAAAACTTAAATCAGCAATGGCAAATGATCAAG
GGATAACTAAACATGACATAGGACTTGCTGAACGCGCAGTGTATAAAGTGTATTTTAAAAATGGTTCGTCAAAATATGTA
GACTTAAAAACTGAGTATAAAGATGAAAGAGTATTTAAAGCAACTGACATTAAAAAGGTAGATATTGAACTTAAATTCTA
A

Upstream 100 bases:

>100_bases
AGAAACAAGTAGTGAATTTAAAATCAGACATCTTTACACCTAATTTATTTAGTGCCAAAGATATTAAAAAGATTGATATT
GATGTAAAACAATACACTAA

Downstream 100 bases:

>100_bases
TCTTTAATTTTATAATAAGGCATCTCACAATCGTGGGGTGCCTTTTACATTTGTAGAGATGTGATGCTTGAATGTTTGAA
GTGATTTGCCAAAAGTTATA

Product: truncated map-w protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKKKINKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSIKLKSAMANDQGITKHDIGLAERAVYKVYFKNGSSKYV
DLKTEYKDERVFKATDIKKVDIELKF

Sequences:

>Translated_106_residues
MKKKINKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSIKLKSAMANDQGITKHDIGLAERAVYKVYFKNGSSKYV
DLKTEYKDERVFKATDIKKVDIELKF
>Mature_106_residues
MKKKINKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSIKLKSAMANDQGITKHDIGLAERAVYKVYFKNGSSKYV
DLKTEYKDERVFKATDIKKVDIELKF

Specific function: Binds various plasma and ECM-proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 MAP repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005298
- InterPro:   IPR016091 [H]

Pfam domain/function: PF03642 MAP [H]

EC number: NA

Molecular weight: Translated: 12260; Mature: 12260

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKINKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSIKLKSAMANDQGITKHDI
CCCCCCCCCCEEEEEEHHHHHHHHCCCEEEEECCEEEEEEEEEEEEECCCCCCCCCCCCC
GLAERAVYKVYFKNGSSKYVDLKTEYKDERVFKATDIKKVDIELKF
CCCCCEEEEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEEEEEC
>Mature Secondary Structure
MKKKINKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSIKLKSAMANDQGITKHDI
CCCCCCCCCCEEEEEEHHHHHHHHCCCEEEEECCEEEEEEEEEEEEECCCCCCCCCCCCC
GLAERAVYKVYFKNGSSKYVDLKTEYKDERVFKATDIKKVDIELKF
CCCCCEEEEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2726469 [H]