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The map label for this gene is gatA

Identifier: 15924890

GI number: 15924890

Start: 2041323

End: 2042780

Strand: Reverse

Name: gatA

Synonym: SAV1900

Alternate gene names: 15924890

Gene position: 2042780-2041323 (Counterclockwise)

Preceding gene: 15924891

Following gene: 15924889

Centisome position: 70.97

GC content: 34.22

Gene sequence:

>1458_bases
ATGAGCATTCGCTACGAATCGGTTGAGAATTTATTAACTTTAATAAAAGACAAAAAAATCAAACCATCTGATGTTGTTAA
AGATATATATGATGCAATTGAAGAGACTGATCCAACAATTAAGTCTTTTCTAGCGCTGGATAAAGAAAATGCAATCAAAA
AAGCGCAAGAATTGGATGAATTACAAGCAAAAGATCAAATGGATGGCAAATTATTTGGTATTCCAATGGGTATAAAAGAT
AACATTATTACAAACGGATTAGAAACAACATGTGCAAGTAAAATGTTAGAAGGTTTTGTGCCAATTTACGAATCTACTGT
AATGGAAAAACTACATAAAGAGAATGCCGTTTTAATCGGTAAATTAAATATGGATGAGTTTGCAATGGGTGGTTCAACAG
AAACATCTTATTTCAAAAAAACAGTTAACCCATTTGACCATAAAGCAGTACCAGGTGGTTCATCAGGTGGATCTGCAGCA
GCAGTTGCAGCTGGCTTAGTACCACTTAGCTTAGGTTCAGACACAGGTGGTTCAATTAGACAACCGGCTGCATATTGTGG
CGTTGTCGGTATGAAACCAACATACGGTCGTGTATCTCGATTTGGATTAGTTGCTTTTGCATCTTCATTAGACCAAATTG
GTCCATTGACTCGAAATGTAAAAGATAATGCAATCGTATTAGAAGCTATTTCTGGTGCAGATGTTAATGACTCTACAAGT
GCACCAGTTGATGATGTAGACTTTACATCTGAAATTGGTAAAGATATTAAAGGATTAAAAGTTGCATTACCTAAAGAATA
CTTAGGTGAAGGTGTAGCTGATGACGTAAAAGAAGCAGTTCAAAACGCTGTAGAAACTTTAAAATCTTTAGGTGCTGTCG
TTGAGGAAGTATCATTGCCAAATACTAAATTTGGTATTCCATCATATTACGTGATTGCATCATCAGAAGCTTCGTCAAAC
CTTTCTCGTTTTGACGGAATTCGTTATGGTTATCATTCTAAAGAAGCTCATTCATTAGAAGAATTATATAAAATGTCAAG
ATCTGAAGGTTTCGGTAAAGAAGTAAAACGTCGTATTTTCTTAGGTACATTTGCATTAAGTTCAGGTTACTACGATGCTT
ACTATAAAAAATCTCAAAAAGTTAGAACATTGATTAAAAATGACTTTGATAAAGTATTCGAAAATTATGATGTAGTAGTT
GGTCCAACAGCGCCTACAACTGCGTTTAATTTAGGTGAAGAAATTGATGATCCATTAACAATGTATGCCAATGATTTATT
AACAACACCAGTAAACTTAGCTGGATTACCTGGTATTTCTGTTCCTTGTGGACAATCAAATGGCCGACCAATCGGTTTAC
AGTTCATTGGTAAACCATTCGATGAAAAAACGTTATATCGTGTCGCTTATCAATATGAAACACAATACAATTTACATGAC
GTTTATGAAAAATTATAA

Upstream 100 bases:

>100_bases
ATTAAAGGTATTCCGCAAGAATTAGCTTTGAAAAATGCCAAAGAAACAGAAGATGGACAATTTAAAGTGCCTACAATCAT
GAATGAGGAGGACGCGTAAG

Downstream 100 bases:

>100_bases
GGAGTGGAAATCATGCATTTTGAAACAGTTATAGGACTTGAAGTTCACGTAGAGTTAAAAACGGACTCAAAAATGTTTTC
TCCATCACCAGCGCATTTTG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit A

Products: NA

Alternate protein names: Glu-ADT subunit A

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKD
NIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA
AVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSN
LSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVV
GPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
VYEKL

Sequences:

>Translated_485_residues
MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKD
NIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA
AVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSN
LSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVV
GPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
VYEKL
>Mature_484_residues
SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDN
IITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAA
VAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSA
PVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNL
SRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVG
PTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHDV
YEKL

Specific function: Furnishes a means for formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu- tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activa

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family

Homologues:

Organism=Homo sapiens, GI222831590, Length=496, Percent_Identity=38.7096774193548, Blast_Score=325, Evalue=4e-89,
Organism=Homo sapiens, GI195972892, Length=484, Percent_Identity=25.2066115702479, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI166795287, Length=164, Percent_Identity=34.7560975609756, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17543272, Length=429, Percent_Identity=37.7622377622378, Blast_Score=286, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI17537465, Length=489, Percent_Identity=23.9263803680982, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17556264, Length=188, Percent_Identity=32.4468085106383, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17538252, Length=231, Percent_Identity=30.7359307359307, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71990152, Length=320, Percent_Identity=26.5625, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17556276, Length=270, Percent_Identity=30, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17556278, Length=270, Percent_Identity=30, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17538254, Length=255, Percent_Identity=29.8039215686275, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323950, Length=416, Percent_Identity=37.2596153846154, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6319685, Length=451, Percent_Identity=31.2638580931264, Blast_Score=134, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24648113, Length=488, Percent_Identity=39.5491803278689, Blast_Score=311, Evalue=5e-85,
Organism=Drosophila melanogaster, GI24644968, Length=504, Percent_Identity=26.3888888888889, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24652985, Length=505, Percent_Identity=24.5544554455446, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI19922090, Length=505, Percent_Identity=24.5544554455446, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24652981, Length=505, Percent_Identity=24.5544554455446, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24652983, Length=505, Percent_Identity=24.5544554455446, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI161078093, Length=507, Percent_Identity=25.8382642998028, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI45550774, Length=234, Percent_Identity=31.1965811965812, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24648435, Length=234, Percent_Identity=31.1965811965812, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24648437, Length=234, Percent_Identity=31.1965811965812, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI21356731, Length=228, Percent_Identity=28.0701754385965, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24648441, Length=166, Percent_Identity=33.7349397590361, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24648439, Length=166, Percent_Identity=33.7349397590361, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATA_STAA1 (A7X427)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442475.1
- ProteinModelPortal:   A7X427
- SMR:   A7X427
- STRING:   A7X427
- EnsemblBacteria:   EBSTAT00000004435
- GeneID:   5560513
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1885
- eggNOG:   COG0154
- GeneTree:   EBGT00050000024611
- HOGENOM:   HBG481888
- OMA:   TESSCYG
- ProtClustDB:   PRK00012
- BioCyc:   SAUR418127:SAHV_1885-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00120
- InterPro:   IPR000120
- InterPro:   IPR020556
- InterPro:   IPR004412
- Gene3D:   G3DSA:3.90.1300.10
- PANTHER:   PTHR11895
- TIGRFAMs:   TIGR00132

Pfam domain/function: PF01425 Amidase; SSF75304 Amidase_sig_enz

EC number: 6.3.5.-

Molecular weight: Translated: 52801; Mature: 52670

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00571 AMIDASES

Important sites: ACT_SITE 79-79 ACT_SITE 154-154 ACT_SITE 178-178

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHH
LQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIG
HHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIR
ECCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCC
QPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCCC
APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP
CCCCCCHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIF
CCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCHHCCCHHH
MYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHEECCCCCCHHHHHHHHHHHCCCCCHHH
VYEKL
HHHHC
>Mature Secondary Structure 
SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHH
LQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIG
HHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIR
ECCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCC
QPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCCC
APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP
CCCCCCHHHHHHCCCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIF
CCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCHHCCCHHH
MYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHEECCCCCCHHHHHHHHHHHCCCCCHHH
VYEKL
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA