Click here to switch to the map view.

The map label for this gene is 15924857

Identifier: 15924857

GI number: 15924857

Start: 2009347

End: 2009889

Strand: Reverse

Name: 15924857

Synonym: SAV1867

Alternate gene names: NA

Gene position: 2009889-2009347 (Counterclockwise)

Preceding gene: 15924858

Following gene: 15924856

Centisome position: 69.82

GC content: 32.97

Gene sequence:

>543_bases
ATGGTCAGAGAATCCATACCTAAAGAAGGGGAAAACATTAAAATTCAGAGTTATAAACATGATGGTAAGATTCATCGCGT
TTGGTCTGAAACAACAATATTAAAGGGTACTGATCATGTTGTCATTGGTGGCAATGATCATACGTTAGTGACTGAAAGTG
ACGGAAGAACTTGGATAACACGTGAACCGGCAATTGTTTACTTTCACTCAGAATATTGGTTTAATGTTATCTGCATGTTT
AGAGAAGATGGAATTTATTACTATTGCAATTTGTCATCACCATTTGTTTGTGATGAAGAGGCATTAAAATATATAGACTA
TGATTTAGATATTAAAGTATATCCAAACGGAAAGTATCATTTATTAGATGAAGATGAATATGAGCAACATATGAATCAAA
TGAATTATCCGCATGATATTGATATTATTTTAAGACGCAACGTGGACATTCTTCAACAATGGATAGAACAGAAGAAGGGC
CCATTCGCGCCAGATTTTATCAAAGTTTGGAAAGAACGTTACAAAAAAATTAGACAGTATTAA

Upstream 100 bases:

>100_bases
TAGTAAAATCTTATTTCGTAAAAATATGTATTTATATAATACTATTTCTGAAATATGCTATAATTTATAATGGTTAAATT
AACAGAAGGTGGTGTGGAGT

Downstream 100 bases:

>100_bases
GCAAATAAAGTGTAAATACTGATTAAATCATTTATATTGACTTAGTGATGTAAAGAAGTATGATAACTTTTGCTGTCGTG
TGGGGACACAGTATCCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMF
REDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKG
PFAPDFIKVWKERYKKIRQY

Sequences:

>Translated_180_residues
MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMF
REDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKG
PFAPDFIKVWKERYKKIRQY
>Mature_180_residues
MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMF
REDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKG
PFAPDFIKVWKERYKKIRQY

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007295
- InterPro:   IPR016882 [H]

Pfam domain/function: PF04167 DUF402 [H]

EC number: NA

Molecular weight: Translated: 21704; Mature: 21704

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWIT
CCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEEECCCEEEECCCCCEEEECCCCCEEEE
REPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYH
ECCEEEEEECCCEEEEEEEEEECCEEEEEECCCCEEECHHHHHHCCCCEEEEECCCCEEE
LLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRQY
ECCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWIT
CCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEEECCCEEEECCCCCEEEECCCCCEEEE
REPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYH
ECCEEEEEECCCEEEEEEEEEECCEEEEEECCCCEEECHHHHHHCCCCEEEEECCCCEEE
LLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRQY
ECCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA