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The map label for this gene is ygaF [H]

Identifier: 15924853

GI number: 15924853

Start: 2003918

End: 2004373

Strand: Reverse

Name: ygaF [H]

Synonym: SAV1863

Alternate gene names: 15924853

Gene position: 2004373-2003918 (Counterclockwise)

Preceding gene: 15924856

Following gene: 15924852

Centisome position: 69.63

GC content: 28.73

Gene sequence:

>456_bases
ATGTTGCAAAAAGGAGAACAATTTCCAATATTTAAATTAGAAAATCAAGACGGAACTGTCATTACAAATGATACATTAAA
AGGTAAAAAGGCGATTATATATTTTTATCCTAGAGATAATACACCTACTTGTACCACAGAAGCTTGTGACTTTAGAGACA
ATTTAGAAATGTTCAATGATTTAGATGTTGCAGTATATGGTATAAGCGGTGATTCAAAGAAAAAACACCAAAATTTTATT
GAGAAACACGGATTGAATTTCGATTTATTAGTAGATGAAGATTTTAAATTAGCTAAAGAAACAGGCGTATATCAGTTAAA
AAAATCATTTGGCAAAGAAAGTATGGGTATTGTAAGAACAACTTTTATAATAGATGAACAAGGTAAAGTATTAGATGTTA
TCGAGAAGGTTAAGGTTAAAACACAAATAGAAGAACTTAAAAACATTTTGGGGTGA

Upstream 100 bases:

>100_bases
TCACTTTCACTAAAATTCATTTATATCAACCTCTTTTAATTTAATATTTTCATCTAATATCGTATCATAAAATTATTATA
ATGAAGAAAAAGGTGATTAT

Downstream 100 bases:

>100_bases
CATATATGAAAGTTGTTGGGTTAAATCGTATGCGTGAAGTTGAAACTGAATTACAACAACGCTTTTCAGATTTAGATTTT
AAATTTTATAAAAAAGCATC

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFNDLDVAVYGISGDSKKKHQNFI
EKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRTTFIIDEQGKVLDVIEKVKVKTQIEELKNILG

Sequences:

>Translated_151_residues
MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFNDLDVAVYGISGDSKKKHQNFI
EKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRTTFIIDEQGKVLDVIEKVKVKTQIEELKNILG
>Mature_151_residues
MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFNDLDVAVYGISGDSKKKHQNFI
EKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRTTFIIDEQGKVLDVIEKVKVKTQIEELKNILG

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=149, Percent_Identity=38.255033557047, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17260; Mature: 17260

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFND
CCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCC
LDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRT
CEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHCCCCCCCEEEE
TFIIDEQGKVLDVIEKVKVKTQIEELKNILG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFND
CCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHCC
LDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRT
CEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHCCCCCCCEEEE
TFIIDEQGKVLDVIEKVKVKTQIEELKNILG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]