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The map label for this gene is yhbA [H]

Identifier: 15924846

GI number: 15924846

Start: 1987248

End: 1988375

Strand: Reverse

Name: yhbA [H]

Synonym: SAV1856

Alternate gene names: 15924846

Gene position: 1988375-1987248 (Counterclockwise)

Preceding gene: 15924847

Following gene: 15924845

Centisome position: 69.08

GC content: 36.97

Gene sequence:

>1128_bases
TTGGATACAAAGCAGTTAAAGCAAGATATCATTGACTATGCATATACAATTGGTATCGACAGTATTGGATTTACAACTGC
CGATCCCTTTGATGAATTGAAGCAAAAGCTAGAAGCATATCATGCAAATGGTTATGCCTCAGGATTTGAAGAATCTGATA
TTGCTTTACGAACGGAGCCTAAATTATCCTTACCAACAGCAAGGTCAATCATAGCAATTGCAGTTGGTTATCCTAACAAA
CTGAAAGGTGCACCTAAGAGTGTTAGAGGTGATCGCAGAGGCTTATTTGCTAGAGCATCGTGGGGTCAAGATTATCATAC
AATTATGCGTAAACGATTAGACATGTTAGCTGCATTTATTGAATCTAAAGTTCCAGATGTTGAAATCAAATCTATGGTAG
ATACGGGTGTATTATCAGATAGGGCAGTAGCAGAACGTGCAGGTTTAGGATTTGTTGGTCGTAATGGCTTTGTCATCAAT
CCTAAACTAGGAACATGGACATACCTCGGTGAAATGTTAGTCAGTATACCTTTTGAACCTGATGATCCATTATTAGATAG
CTGTGGTGATTGTACAATTTGTGTTGATCGTTGTCCAACAAGTGCATTAGTTGGAAATGGCCAATTAAATAGTCAGAAAT
GCATTAGTTTTTTAACGCAAACAAAAGGCTATATGCCTGACCAATATCGTTATAAAATTGGGAATAGATTATATGGTTGC
GATACGTGTCAACAAGTTTGTCCGAAAAATAGAGGTATTAATACCGAACAAGATGACATCATTTTGGAACCAGAAATTTT
AAAGCCAAGATTAGTACCTTTACTACGTATGTCTAATAAAGAATTCAAACAAACATATGGTCACCTTGCAGGTGCTTGGC
GTGGTAAAAAGCCGATACAACGAAATGCTATTTTAGCATTAGCGCATTTTAATGAAGTGGATGCAATTCCAGAATTGAAA
AAAGTTGCAACAACAGATGAAAGACCGATGATTCGAGCAACTGCTTATTGGGCCATTGGTCAAATTCTTGGGGAAGAAGC
AAGAGATTTTATCAATGCTAATTATGATCAAGAGGATGCAGAAGTTCAGAATGAAATGATAAAAGGATTAGACACAAGGA
GAGAATAG

Upstream 100 bases:

>100_bases
TATTCAAGCTTTTTATTATTAAAATTATGTGAAATGAAACCTCAATATGAATAATGGTTGTGTTAAAATAACATAGTATT
ATTTTATGGGGGGCATACGA

Downstream 100 bases:

>100_bases
TAATATGACAAATCATATCGTTTTATATCAACCAGAAATCCCAGCTAATACTGGTAACATTGCACGTACGTGTGCAGGTA
CAAACACACATTTACATTTA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNK
LKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
PKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGC
DTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELK
KVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE

Sequences:

>Translated_375_residues
MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNK
LKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
PKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGC
DTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELK
KVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE
>Mature_375_residues
MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNK
LKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
PKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGC
DTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELK
KVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=346, Percent_Identity=30.3468208092486, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 41954; Mature: 41954

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
KLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFI
CCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
ESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEP
HHCCCCCHHHHHHHHCCCCHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHHHHCCCCCC
DDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGC
CCCHHHCCCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCEEECC
DTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQ
HHHHHHCCCCCCCCCCCCCEEECCHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
RNAILALAHFNEVDAIPELKKVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDA
CCCEEEEEECCHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
EVQNEMIKGLDTRRE
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
KLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFI
CCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
ESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEP
HHCCCCCHHHHHHHHCCCCHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHHHHCCCCCC
DDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGC
CCCHHHCCCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCEEECC
DTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQ
HHHHHHCCCCCCCCCCCCCEEECCHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
RNAILALAHFNEVDAIPELKKVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDA
CCCEEEEEECCHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
EVQNEMIKGLDTRRE
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]