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The map label for this gene is tnp

Identifier: 15924796

GI number: 15924796

Start: 1934771

End: 1935271

Strand: Reverse

Name: tnp

Synonym: SAV1806

Alternate gene names: NA

Gene position: 1935271-1934771 (Counterclockwise)

Preceding gene: 15924797

Following gene: 15924795

Centisome position: 67.23

GC content: 30.94

Gene sequence:

>501_bases
ATGAAATTATCTTTAGACATAAATACTGATTTTGAAGTTACTACTCTTACAGATTTACCAAAATTAAAAATTGTCATGGA
GAACTTAAACATGAAAATAAACAAAAGTGAAATAGCGAGACACATGGGTGTTTATAGAAGAACAGTTGATAAATATTTAA
ATGGCTTTGAGCCAACCAAAAAGAGAAATCGTCAGTCTATTATTGACAAGTATTATCCTATCATCGAAAAATTACTTTCA
GACTCTAGTGAACAAAAGTTCTACTATAAGCTTATTCTTTGGCAATATTTGAAAGATAAACATGGATTAACCTGTGCATA
TTCTACATTTAGAGCTTATATCCTTAAACATGATGAATTTAATCGTTATTTTATGAAAGGTTATCAACGGTTGTCGCCTA
AAGGCAAAACGAGATTCGAGACAAAAGCCAGTCATCAAGCACAGTTTGACTGGAAAGAAGGCATTAACTTTAAAACGAAG
GATAATCAAATGGTCCTTTAG

Upstream 100 bases:

>100_bases
AGTTTAACTGGAAATGATAATTTAATAATGTGCACTTTTGATTGTTTAAACATGTACAATTTTTAAAAACCTATAGATAA
TTTTATTGAGATGAACAACA

Downstream 100 bases:

>100_bases
AAGGGATAAACAACAAAATAAAATTAATTAAACGTACATCTTTTGGTTAAGGAAGTTATAATCATTTGCGAAATCGAATA
TTATTATGTTCAAAACTTTA

Product: transposase homolog for IS232

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMGVYRRTVDKYLNGFEPTKKRNRQSIIDKYYPIIEKLLS
DSSEQKFYYKLILWQYLKDKHGLTCAYSTFRAYILKHDEFNRYFMKGYQRLSPKGKTRFETKASHQAQFDWKEGINFKTK
DNQMVL

Sequences:

>Translated_166_residues
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMGVYRRTVDKYLNGFEPTKKRNRQSIIDKYYPIIEKLLS
DSSEQKFYYKLILWQYLKDKHGLTCAYSTFRAYILKHDEFNRYFMKGYQRLSPKGKTRFETKASHQAQFDWKEGINFKTK
DNQMVL
>Mature_166_residues
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMGVYRRTVDKYLNGFEPTKKRNRQSIIDKYYPIIEKLLS
DSSEQKFYYKLILWQYLKDKHGLTCAYSTFRAYILKHDEFNRYFMKGYQRLSPKGKTRFETKASHQAQFDWKEGINFKTK
DNQMVL

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 19944; Mature: 19944

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMGVYRRTVDKYLNGFEPTK
CEEEEECCCCEEEEEECCCCHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCHH
KRNRQSIIDKYYPIIEKLLSDSSEQKFYYKLILWQYLKDKHGLTCAYSTFRAYILKHDEF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCH
NRYFMKGYQRLSPKGKTRFETKASHQAQFDWKEGINFKTKDNQMVL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCCC
>Mature Secondary Structure
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMGVYRRTVDKYLNGFEPTK
CEEEEECCCCEEEEEECCCCHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCHH
KRNRQSIIDKYYPIIEKLLSDSSEQKFYYKLILWQYLKDKHGLTCAYSTFRAYILKHDEF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCH
NRYFMKGYQRLSPKGKTRFETKASHQAQFDWKEGINFKTKDNQMVL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2174857 [H]