Click here to switch to the map view.

The map label for this gene is ytmP [H]

Identifier: 15924739

GI number: 15924739

Start: 1878130

End: 1878921

Strand: Reverse

Name: ytmP [H]

Synonym: SAV1749

Alternate gene names: 15924739

Gene position: 1878921-1878130 (Counterclockwise)

Preceding gene: 15924740

Following gene: 15924738

Centisome position: 65.27

GC content: 34.47

Gene sequence:

>792_bases
TTGGAGCAGTTTTATCAATTAGGGTGGACACTTGATTCAGCAGGTGGTGCATCTGGTGAAGCATATATGGCTGAACAAGA
TGGACAAAAGTTGTTTTTAAAACGAAATTCAAATCCATTTATTGCGGCATTATCAGCAGAAGGTATTGTGCCCAAATTAG
TATGGACGAAACGCATAGAAACAGGCGAGGTTGTTACAGCACAACATTGGAAAAATGGGCGTGAACTATCTTCAAACGAA
ATGAAGCAAACAAGAGTTGCACATTTATTAAAGAAGATACACAATTCTAGACCTTTATTAAGTATGTTAAAGCGTATGGA
AATGGAACCTATTACTCCTGAGATTATGCTTAATAAAATTAATGCCTCTTTATCAAGAGAAGTTTTAACACATCATATTG
TGAGAAAATCATTAACCTATTTAGAAGAGCATATACCGAGTTTAGATTCGCGTTTTTTCACTGTTGTACATGGTGATGTG
AATCATAATAATTGGTTATTATCCGATCGAGATGAACTATTTTTAGTTGATTGGGAAGGTGCAATGATTGCAGACCCGGC
AATTGATATCGGAATGCTGCTTTACAACTATGTTCCACAACAACAATGGTCTGAATGGCTTGAAACATATGGTGTTCAAG
AGAGCTTGAATTTAAATAAACGTATGAAATGGTATACGGTAATTCAATCTATAGGTCTTGTTCAATGGTATGAAGAGCAA
AAAAGATATAAGGATATGAACACTTGGCTTAAATTCCTAAATGAAGTTATGAATAGTAACATGTTTATTTAA

Upstream 100 bases:

>100_bases
ACATAATATTTGTACCAGTATGGTGTTATAAATTAGAATATATGGCTCTTGAAAAACCTATTTCTAGAGCCATTTTCTAA
TTGAAAGTGAGGTGGACGAG

Downstream 100 bases:

>100_bases
GAGGAGAATAAAATATGAGAGTTCGATACAAACCATGGGCTGAAGATTATTTAAAAGATCATCCTGAATTGGTTGACATG
GAAGGTCAACATGCAGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELSSNE
MKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDV
NHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWYEEQ
KRYKDMNTWLKFLNEVMNSNMFI

Sequences:

>Translated_263_residues
MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELSSNE
MKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDV
NHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWYEEQ
KRYKDMNTWLKFLNEVMNSNMFI
>Mature_263_residues
MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELSSNE
MKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDV
NHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWYEEQ
KRYKDMNTWLKFLNEVMNSNMFI

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30753; Mature: 30753

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIE
CCCHHHHCCEEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCC
TGEVVTAQHWKNGRELSSNEMKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKI
CCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
NASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDVNHNNWLLSDRDELFLVDWEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEECCC
AMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWYEEQ
CEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KRYKDMNTWLKFLNEVMNSNMFI
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIE
CCCHHHHCCEEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCC
TGEVVTAQHWKNGRELSSNEMKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKI
CCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
NASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDVNHNNWLLSDRDELFLVDWEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEECCC
AMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWYEEQ
CEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KRYKDMNTWLKFLNEVMNSNMFI
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]