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The map label for this gene is glpQ [H]

Identifier: 15923949

GI number: 15923949

Start: 1001054

End: 1001983

Strand: Reverse

Name: glpQ [H]

Synonym: SAV0959

Alternate gene names: 15923949

Gene position: 1001983-1001054 (Counterclockwise)

Preceding gene: 15923950

Following gene: 15923943

Centisome position: 34.81

GC content: 32.9

Gene sequence:

>930_bases
ATGACTAACTCTTCGAAAAGCTTCACTAAATTTATGGCTGCTTCTGCTGTTTTTACTATGGGATTTTTATCAGTACCTAC
TGCTGGCGCTGAACAAACAAATCAAATTGCAAATAAACCTCAGGCTATTCAATGGCATACAAATTTAACGAATGAGCGAT
TCACTACTATCGCACATCGTGGCGCAAGTGGCTATGCACCAGAGCATACGTTTCAAGCATATGATAAGAGTCATAATGAG
TTAAAAGCATCTTATATCGAAATTGATTTACAACGTACCAAAGATGGACATTTAGTTGCTATGCATGATGAAACTGTTAA
CCGTACAACAAATGGACACGGTAAAGTTGAGGATTATACCCTTGATGAATTAAAACAGTTAGATGCAGGAAGTTGGTTTA
ATAAAAAATATCCAAAATACGCAAGAGCAAGTTATAAAAATGCTAAAGTACCCACTTTAGATGAAATTTTAGAACGTTAT
GGCCCGAATGCAAACTATTATATTGAAACAAAGTCACCTGATGTATACCCAGGAATGGAAGAACAATTATTAGCTTCATT
GAAAAAGCATCACCTTTTAAATAACAATAAATTAAAAAATGGACATGTAATGATTCAATCATTTTCTGACGAAAGTTTAA
AGAAAATTCATCGTCAAAATAAGCATGTGCCATTAGTAAAATTAGTTGATAAAGGTGAACTACAACAATTTAACGACCAA
CGCTTAAAAGAGATACGCTCTTATGCGATTGGATTAGGTCCTGATTATACAGATTTAACTGAACAAAATACCCATCATTT
AAAAGACTTAGGATTTATAGTACATCCTTATACAGTGAATGAAAAAGCTGATATGTTACGATTAAATAAATATGGCGTTG
ATGGTGTCTTTACAAATTTCGCTGATAAATATAAAGAAGTCATTAAGTAG

Upstream 100 bases:

>100_bases
ATAAATTGTAAAAGAAATGTGTAAAGCGTTTTCACAAGCAGGTTTTTGTAGTATTTTAAAATTGTTAGACTACAAATAAA
GAGATGAAAGGATAAAGACT

Downstream 100 bases:

>100_bases
TATTGTTAAACTAGAAAACATAAATACAAAAATATAGCTATTACTATAAAAAACAGCAGTAAGATATTTCCAAATTGAAA
TTATCCTACTGCTGTCTTTT

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNE
LKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERY
GPNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK

Sequences:

>Translated_309_residues
MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNE
LKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERY
GPNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK
>Mature_308_residues
TNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNEL
KASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYG
PNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQR
LKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=173, Percent_Identity=31.2138728323699, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1788572, Length=330, Percent_Identity=30.6060606060606, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789858, Length=253, Percent_Identity=27.6679841897233, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 35311; Mature: 35180

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHC
GASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYT
CCCCCCCCHHHHHHHCCHHHHEEEEEEEEEEECCCCCEEEEECCHHCCCCCCCCCCCCCC
LDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGME
HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHH
EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHH
RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEECCEEECCCHHHHHHHHCCCCHHHHHH
ADKYKEVIK
HHHHHHHHC
>Mature Secondary Structure 
TNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHC
GASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYT
CCCCCCCCHHHHHHHCCHHHHEEEEEEEEEEECCCCCEEEEECCHHCCCCCCCCCCCCCC
LDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGME
HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCHH
EQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQ
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHH
RLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEECCEEECCCHHHHHHHHCCCCHHHHHH
ADKYKEVIK
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]