Definition | Staphylococcus aureus subsp. aureus Mu50, complete genome. |
---|---|
Accession | NC_002758 |
Length | 2,878,529 |
Click here to switch to the map view.
The map label for this gene is 15923407
Identifier: 15923407
GI number: 15923407
Start: 462845
End: 463549
Strand: Reverse
Name: 15923407
Synonym: SAV0417
Alternate gene names: NA
Gene position: 463549-462845 (Counterclockwise)
Preceding gene: 15923408
Following gene: 15923406
Centisome position: 16.1
GC content: 27.8
Gene sequence:
>705_bases ATGTCTAAAAATATCAATCAAGCAAATAGTAAATTAAATACGTCAAACAAAAAACTAAAACAAGCTTATTCAAAATCCGA TAGTAAAAACATGAAAGTTATATACATGCCTCATTGGCTAGAGTTTTATTCAATTGCTATACATAGCGATGTTACAAGCA ATAAAAAAAGATATTATAAATCATTTAGTAGAGGAACAGTGGTATATGTAAAACTAGGGAGTAATATTGGAAGTGAGTTT TCTGGTAATCATTTTTGTGTAATATTAGATAACAAAGACAATAAAGGAAAAGAAACAGTTACAATAGTTCCACTTTCTTC CAAAGGTAATAAAAATTATTTGAAGTTAAACGAATCGGTGCTAAATCTAACAGCAACAGATTTAAAAAAACAGATTATCG ATATCAGTAGTAAAGTACAAGCATTAACCCAAAAATATAGAGATATTGACATTAAACTTAGCACAGAAGATAAAAAGCTT TTGTCTAACTTAAATCAAAAAGCTAATGAACTGTATAGAGTGATAGGTGTTTATTCCAAGCACAAAGGGAAAGATACATA CGTTAATATATCAGCAATTACAACAATAAGCAAAAGACGTATAAGCAAAATAAATGATTCTGATCCTACTGGAACGATAA TAATTTCAGAAGATGACATGAATGAAATCGAAAAGCAATTAAAGATAAAGTTCTTTTCTAATTGA
Upstream 100 bases:
>100_bases TGGTTTTATAGTAACATCTATTTTCGTACCATTCATGTTAATTTCAGTGCTAATAATGCTGATATAAAGAAGAATAAATT GATTAGGAGAACACTATTTA
Downstream 100 bases:
>100_bases ATTGTAATATTACATCTGATATAATTGATTTACAAATTCCCGGTAACCATTCCGGCTTCATTCTCTTGAAGAATGACATA TTCTCAGCGTTTTAGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYSIAIHSDVTSNKKRYYKSFSRGTVVYVKLGSNIGSEF SGNHFCVILDNKDNKGKETVTIVPLSSKGNKNYLKLNESVLNLTATDLKKQIIDISSKVQALTQKYRDIDIKLSTEDKKL LSNLNQKANELYRVIGVYSKHKGKDTYVNISAITTISKRRISKINDSDPTGTIIISEDDMNEIEKQLKIKFFSN
Sequences:
>Translated_234_residues MSKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYSIAIHSDVTSNKKRYYKSFSRGTVVYVKLGSNIGSEF SGNHFCVILDNKDNKGKETVTIVPLSSKGNKNYLKLNESVLNLTATDLKKQIIDISSKVQALTQKYRDIDIKLSTEDKKL LSNLNQKANELYRVIGVYSKHKGKDTYVNISAITTISKRRISKINDSDPTGTIIISEDDMNEIEKQLKIKFFSN >Mature_233_residues SKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYSIAIHSDVTSNKKRYYKSFSRGTVVYVKLGSNIGSEFS GNHFCVILDNKDNKGKETVTIVPLSSKGNKNYLKLNESVLNLTATDLKKQIIDISSKVQALTQKYRDIDIKLSTEDKKLL SNLNQKANELYRVIGVYSKHKGKDTYVNISAITTISKRRISKINDSDPTGTIIISEDDMNEIEKQLKIKFFSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26619; Mature: 26488
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYSIAIHSDVTSNKKRYYK CCCCCCHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHEEEEEECCCCCCHHHHHH SFSRGTVVYVKLGSNIGSEFSGNHFCVILDNKDNKGKETVTIVPLSSKGNKNYLKLNESV HCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECHHH LNLTATDLKKQIIDISSKVQALTQKYRDIDIKLSTEDKKLLSNLNQKANELYRVIGVYSK HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC HKGKDTYVNISAITTISKRRISKINDSDPTGTIIISEDDMNEIEKQLKIKFFSN CCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHEEEEEECC >Mature Secondary Structure SKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYSIAIHSDVTSNKKRYYK CCCCCHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHEEEEEECCCCCCHHHHHH SFSRGTVVYVKLGSNIGSEFSGNHFCVILDNKDNKGKETVTIVPLSSKGNKNYLKLNESV HCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECHHH LNLTATDLKKQIIDISSKVQALTQKYRDIDIKLSTEDKKLLSNLNQKANELYRVIGVYSK HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC HKGKDTYVNISAITTISKRRISKINDSDPTGTIIISEDDMNEIEKQLKIKFFSN CCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA