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The map label for this gene is hrtB [H]

Identifier: 15923298

GI number: 15923298

Start: 351524

End: 352573

Strand: Direct

Name: hrtB [H]

Synonym: SAV0308

Alternate gene names: 15923298

Gene position: 351524-352573 (Clockwise)

Preceding gene: 15923297

Following gene: 15923299

Centisome position: 12.21

GC content: 33.14

Gene sequence:

>1050_bases
ATGTTTTTAGCTTGGAATGAAATACGGCGCAACAAATTGAAGTTTGGACTAATTATTGGTGTGTTAACGATGATTAGTTA
CTTGCTATTTTTATTATCTGGATTGGCGAATGGTCTTATCAATATGAATAAAGAAGGCATTGATAAGTGGCAAGCAGATG
CCATTGTTCTAAATAAAGATGCCAATCAAACTGTGCAACAATCTGTTTTTAACAAGAAAGATATTGAAAATAAATACAAG
AAGCAAGCTACTTTGAAGCAAACAGGGGAAATTGTGTCTAATGGCCATCAAAAAGACAATGTTTTAGTGTTCGGTGTTGA
AAAGTCATCATTTTTAGTTCCGAGTTTAATAGAAGGGCATAAAGCGACTAAAGATAATGAAGTGTTAGCTGATGAAACGC
TTAAAAATAAAGGATTTAAAATTGGTGACACATTATCACTATCTCAATCAGATGAAAAATTGCATATCGTAGGTTTTACA
GAAAGTGCAAAATATAATGCGTCACCAGTCATTTTCACGAATGACGCTACCATTGCCAAGATCAATCCTAGATTGACTGG
AGATAAAATTAATGCAGTTGTTGTACGTGATACAAATTGGAAAGACAAAAAATTAAACCAAGAGCTTGAAGCGGTAAGTA
TTAATGACTTTATTGAAAATTTACCAGGTTATAAACCACAGAACTTAACATTAAACTTTATGATTTCATTCTTATTTGTC
ATTTCAGCTACAGTTATAGGCATTTTCTTATATGTCATGACATTACAAAAAACAAGTTTATTTGGCATATTAAAGGCTCA
AGGATTTACGAATGGCTATTTAGCGAACGTAGTTATTTCGCAGACGCTCATATTAGCATTATTTGGTACGGCATTTGGCT
TACTGTTAACAGGCGTTACAGGTGCATTTTTACCTGATGCAGTACCTGTCAAATTCGATGTACTAACATTGCTCGTATTT
GCAATTGTGTTAATGATTGTCTCTGTATTAGGAAGTTTATTCTCCATTTTAACAATTAGAAAAATAGATCCGTTAAAGGC
GATTGGGTAG

Upstream 100 bases:

>100_bases
GAAGGATAAGTGTATGTATAACATTACAGAGCGCAACACGACGTACGTGCATCTAAGAATATAAACAATGTTTAAATCAT
AGTAGTAGGGAGAGAAATGC

Downstream 100 bases:

>100_bases
GAGGTGTAGCAAATGTTGAAATTTGAAAATGTAACAAAGTCATTTAAAGATGGGAATCGTAACATTGAAGCGGTTAAAGA
TACAAATTTTGAGATAAATA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKDANQTVQQSVFNKKDIENKYK
KQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGHKATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFT
ESAKYNASPVIFTNDATIAKINPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTLILALFGTAFGLLLTGVTGAFLPDAVPVKFDVLTLLVF
AIVLMIVSVLGSLFSILTIRKIDPLKAIG

Sequences:

>Translated_349_residues
MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKDANQTVQQSVFNKKDIENKYK
KQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGHKATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFT
ESAKYNASPVIFTNDATIAKINPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTLILALFGTAFGLLLTGVTGAFLPDAVPVKFDVLTLLVF
AIVLMIVSVLGSLFSILTIRKIDPLKAIG
>Mature_349_residues
MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKDANQTVQQSVFNKKDIENKYK
KQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGHKATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFT
ESAKYNASPVIFTNDATIAKINPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTLILALFGTAFGLLLTGVTGAFLPDAVPVKFDVLTLLVF
AIVLMIVSVLGSLFSILTIRKIDPLKAIG

Specific function: Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. HrtB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 38450; Mature: 38450

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHCCCEEEEECC
ANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCC
KATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESAKYNASPVIFTNDATIAK
CCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEE
INPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
ECCCCCCCCEEEEEEECCCCCHHHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHHHHHHHH
ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTLILALFGTAFGLLLTGVT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIRKIDPLKAIG
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MFLAWNEIRRNKLKFGLIIGVLTMISYLLFLLSGLANGLINMNKEGIDKWQADAIVLNKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHCCCEEEEECC
ANQTVQQSVFNKKDIENKYKKQATLKQTGEIVSNGHQKDNVLVFGVEKSSFLVPSLIEGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCC
KATKDNEVLADETLKNKGFKIGDTLSLSQSDEKLHIVGFTESAKYNASPVIFTNDATIAK
CCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEE
INPRLTGDKINAVVVRDTNWKDKKLNQELEAVSINDFIENLPGYKPQNLTLNFMISFLFV
ECCCCCCCCEEEEEEECCCCCHHHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHHHHHHHH
ISATVIGIFLYVMTLQKTSLFGILKAQGFTNGYLANVVISQTLILALFGTAFGLLLTGVT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFLPDAVPVKFDVLTLLVFAIVLMIVSVLGSLFSILTIRKIDPLKAIG
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA