Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
---|---|
Accession | NC_003106 |
Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921681
Identifier: 15921681
GI number: 15921681
Start: 1396787
End: 1397458
Strand: Direct
Name: 15921681
Synonym: ST1392
Alternate gene names: NA
Gene position: 1396787-1397458 (Clockwise)
Preceding gene: 15921680
Following gene: 15921684
Centisome position: 51.83
GC content: 29.02
Gene sequence:
>672_bases ATGTTAACTACTAATGGATACAGGTTAAATGATGAAGATTTTTTAGTAAAGTTAGCAGATAGGATAGATTTTCTTCATTA TTCCATAGATGAATATCATTGGAACGTAAAAGCTCTTGAAAATCTTTGTAAATTCAGACAATATGGTCTTAAAGTAAATG TACAAACTGTTGTAACTAGATATAATTTACATAAGTTAGAGGAAAAAGTCAAGAAAGTTAGGGAATGCAATTATAAAATA GTAATATTACCTGCAATAGATTACCCAGAATCTAAAGTGAAATTATCTCCAGATCCAGTAGAATTATATGAAGTTATGTC AGACCTAAAGAGAAAGTACGGTGCAACAATTAATAATTCATGGGGATTTATTAATGCATTAATTGGTAAGACAAGAATAA AAAGAGTTGTTAGCTACGCTATTTCCATTTATCCCAACGGTGATTTGCCTTATCCAGATGATATAAATGGAAAGATTGTA GGTAATTTAGCTATTGAAAAACTGAATGATATATTGAAAAAACCAGTAGTAAAAGAATTACAGAATTATATGCTAAATAA CCAAGCAAAATTCGAATATCTTCATTTACAAACAGCCTCGTTTAATAGTGTAAAAGATCTTGCGGAATATGTGTATGAAA TGATAAAATGGAGATTTCTTGGGAAAGCTTAA
Upstream 100 bases:
>100_bases CTCATCTATTGTTGTATTATCTTTTGAAGGAGGAGAGCCAACATTACGTAACGATATCCTAGAATTGTTAGAATATGCTC ATGATGGCTCCTTCTATGTC
Downstream 100 bases:
>100_bases CCAAATATTTTCTTATAAATTTCCTGTAAGTCTTCTGTTACTAAATGAGTATATATTTGTGTTGTTCTGATATCCTTATG CCCTAACAATTTTTGAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MLTTNGYRLNDEDFLVKLADRIDFLHYSIDEYHWNVKALENLCKFRQYGLKVNVQTVVTRYNLHKLEEKVKKVRECNYKI VILPAIDYPESKVKLSPDPVELYEVMSDLKRKYGATINNSWGFINALIGKTRIKRVVSYAISIYPNGDLPYPDDINGKIV GNLAIEKLNDILKKPVVKELQNYMLNNQAKFEYLHLQTASFNSVKDLAEYVYEMIKWRFLGKA
Sequences:
>Translated_223_residues MLTTNGYRLNDEDFLVKLADRIDFLHYSIDEYHWNVKALENLCKFRQYGLKVNVQTVVTRYNLHKLEEKVKKVRECNYKI VILPAIDYPESKVKLSPDPVELYEVMSDLKRKYGATINNSWGFINALIGKTRIKRVVSYAISIYPNGDLPYPDDINGKIV GNLAIEKLNDILKKPVVKELQNYMLNNQAKFEYLHLQTASFNSVKDLAEYVYEMIKWRFLGKA >Mature_223_residues MLTTNGYRLNDEDFLVKLADRIDFLHYSIDEYHWNVKALENLCKFRQYGLKVNVQTVVTRYNLHKLEEKVKKVRECNYKI VILPAIDYPESKVKLSPDPVELYEVMSDLKRKYGATINNSWGFINALIGKTRIKRVVSYAISIYPNGDLPYPDDINGKIV GNLAIEKLNDILKKPVVKELQNYMLNNQAKFEYLHLQTASFNSVKDLAEYVYEMIKWRFLGKA
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26065; Mature: 26065
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTNGYRLNDEDFLVKLADRIDFLHYSIDEYHWNVKALENLCKFRQYGLKVNVQTVVTR CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHH YNLHKLEEKVKKVRECNYKIVILPAIDYPESKVKLSPDPVELYEVMSDLKRKYGATINNS HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCC WGFINALIGKTRIKRVVSYAISIYPNGDLPYPDDINGKIVGNLAIEKLNDILKKPVVKEL CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QNYMLNNQAKFEYLHLQTASFNSVKDLAEYVYEMIKWRFLGKA HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLTTNGYRLNDEDFLVKLADRIDFLHYSIDEYHWNVKALENLCKFRQYGLKVNVQTVVTR CCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHH YNLHKLEEKVKKVRECNYKIVILPAIDYPESKVKLSPDPVELYEVMSDLKRKYGATINNS HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCC WGFINALIGKTRIKRVVSYAISIYPNGDLPYPDDINGKIVGNLAIEKLNDILKKPVVKEL CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QNYMLNNQAKFEYLHLQTASFNSVKDLAEYVYEMIKWRFLGKA HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA