Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15921599

Identifier: 15921599

GI number: 15921599

Start: 1329991

End: 1331274

Strand: Direct

Name: 15921599

Synonym: ST1318

Alternate gene names: NA

Gene position: 1329991-1331274 (Clockwise)

Preceding gene: 15921598

Following gene: 15921600

Centisome position: 49.35

GC content: 37.15

Gene sequence:

>1284_bases
ATGAGTCATGGTAATACATTATCTTATTCCGAGGAAGTAATTCCGATAGAAAAGTTAAAAGAAGATGAGGAGTTCAAGTC
ATTAGTACCTCCTAACAATATGAAGGAACAATTAGCCTCCAGTATTGCAAAGAACGGTCAAACATTGCCGATAGACGTTG
ATGAAGACTATGTTATTCTCGATGGCTATACCAGAGTATCAATAATGAAGAATCTGAACTTTAAGGAAGTTAAAGTAAGA
AAATGGAATTTTAAGAGTTCTGAGGATAGGGCTACTGCATATAGGCTTATTGCAATGCTAAACCTACAAAGAAGGCATTT
AGATAAAAACGAGGTATTAAAACTTCTTCGAGAAATTGCTGAGAAGATACTAAAAATTTCAGAAGAAGGACAAAAATTCG
GGGCAAATGCTCCGAATTTTGAACAAAAAGGTGAAACAAATATTAGACCTAGTATGTTAGAGATGACAATGAAGCAAGTT
AAGGAAGAGATTGGGACAAAAGAAGTTAATGATTCAGAAATTAAGGAATATTCCCTCATAAACACAATACCGTACTTAAG
ACAACTAGTAGATGATAAGAAGCTATCAGTAAGGACAGCATATGAACTCTACAAAAAAGCTAAGGACAAACTGCAGAAGA
TAGCTAGTTTACCTCCAACAGAAAGGAATCAGCTACTTACTACAAGAGAAGGAAGAAAGATAATCCTAGAAAGAGACGAC
TTATTAACACAAATTTTAGAACACAGACTTGCAGTAAGTCAAGCTATAAATAAACTAAAGACTGAAGAGAAGTTAGCTAA
GTCTAAGAGAAAGTCCAGGGTAGAGAAGGAGGACTTAGAGGAAGAAGAGGAAGGCGAAACTGAAGGAGGACAGAGAGAGG
ATAGTGAAAGTGATGAGTACCCATTCGTAGAGGATTGGAAAAAAGCAAATGAGGAGCTGAAAAAGGAAGAGGAGGAAAAA
CAAGAACAGCCTATCGTCTCATTACTCTCACCACAGAGGCTTGAGATGTACAGAAAGTTGAGTGAAGAAATGTTCTCTTA
CTGTCCAGAGATTAAGCAATTATATGATGAAAAGAAGCTCAGTGATGATAACATAATAACTCTGGCGGAGGTATGGAGGA
ACTTTCAAATAGCGTTCAAAAACTTGTCCCTGAACTGGCACAGTGTAGCTGAAGAAGTCCTAAGTCCTTATCTGGATAAG
ACGCAACTGGAGGATCTATTCTATAAGTTTGTAAAGGGGACTATGAAGCTCTACCCGAGAGAGGAGTTTGAGGTGTTAAA
ATGA

Upstream 100 bases:

>100_bases
GTTAACTGGGGAGTTTACTGTATAAAAATAATTCAATGTTTGCAAAATACTGGAAATCTTAAAATATACAAAAAGAGATT
TTCTAATAATAGGTGATATC

Downstream 100 bases:

>100_bases
CTGCAAGGGTTATCGCAATACATAATTTTAAGGGAGGAGTAGGAAAGACTACGCTTACAGCAGTCTTAGGACTAGGGCTA
GCAGTAAACCATAGAGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVILDGYTRVSIMKNLNFKEVKVR
KWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIAEKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQV
KEEIGTKEVNDSEIKEYSLINTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD
LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEYPFVEDWKKANEELKKEEEEK
QEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKLSDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDK
TQLEDLFYKFVKGTMKLYPREEFEVLK

Sequences:

>Translated_427_residues
MSHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVILDGYTRVSIMKNLNFKEVKVR
KWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIAEKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQV
KEEIGTKEVNDSEIKEYSLINTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD
LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEYPFVEDWKKANEELKKEEEEK
QEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKLSDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDK
TQLEDLFYKFVKGTMKLYPREEFEVLK
>Mature_426_residues
SHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVILDGYTRVSIMKNLNFKEVKVRK
WNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIAEKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQVK
EEIGTKEVNDSEIKEYSLINTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDDL
LTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEYPFVEDWKKANEELKKEEEEKQ
EQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKLSDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDKT
QLEDLFYKFVKGTMKLYPREEFEVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50160; Mature: 50029

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVIL
CCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEE
DGYTRVSIMKNLNFKEVKVRKWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIA
CCCHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQVKEEIGTKEVNDSEIKEYSLI
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
NTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHH
LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCC
PFVEDWKKANEELKKEEEEKQEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKL
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDKTQLEDLFYKFVKGTMKLYPR
CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEFEVLK
HHHHHCC
>Mature Secondary Structure 
SHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVIL
CCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEE
DGYTRVSIMKNLNFKEVKVRKWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIA
CCCHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQVKEEIGTKEVNDSEIKEYSLI
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
NTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHH
LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCC
PFVEDWKKANEELKKEEEEKQEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKL
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDKTQLEDLFYKFVKGTMKLYPR
CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EEFEVLK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA