Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15921599
Identifier: 15921599
GI number: 15921599
Start: 1329991
End: 1331274
Strand: Direct
Name: 15921599
Synonym: ST1318
Alternate gene names: NA
Gene position: 1329991-1331274 (Clockwise)
Preceding gene: 15921598
Following gene: 15921600
Centisome position: 49.35
GC content: 37.15
Gene sequence:
>1284_bases ATGAGTCATGGTAATACATTATCTTATTCCGAGGAAGTAATTCCGATAGAAAAGTTAAAAGAAGATGAGGAGTTCAAGTC ATTAGTACCTCCTAACAATATGAAGGAACAATTAGCCTCCAGTATTGCAAAGAACGGTCAAACATTGCCGATAGACGTTG ATGAAGACTATGTTATTCTCGATGGCTATACCAGAGTATCAATAATGAAGAATCTGAACTTTAAGGAAGTTAAAGTAAGA AAATGGAATTTTAAGAGTTCTGAGGATAGGGCTACTGCATATAGGCTTATTGCAATGCTAAACCTACAAAGAAGGCATTT AGATAAAAACGAGGTATTAAAACTTCTTCGAGAAATTGCTGAGAAGATACTAAAAATTTCAGAAGAAGGACAAAAATTCG GGGCAAATGCTCCGAATTTTGAACAAAAAGGTGAAACAAATATTAGACCTAGTATGTTAGAGATGACAATGAAGCAAGTT AAGGAAGAGATTGGGACAAAAGAAGTTAATGATTCAGAAATTAAGGAATATTCCCTCATAAACACAATACCGTACTTAAG ACAACTAGTAGATGATAAGAAGCTATCAGTAAGGACAGCATATGAACTCTACAAAAAAGCTAAGGACAAACTGCAGAAGA TAGCTAGTTTACCTCCAACAGAAAGGAATCAGCTACTTACTACAAGAGAAGGAAGAAAGATAATCCTAGAAAGAGACGAC TTATTAACACAAATTTTAGAACACAGACTTGCAGTAAGTCAAGCTATAAATAAACTAAAGACTGAAGAGAAGTTAGCTAA GTCTAAGAGAAAGTCCAGGGTAGAGAAGGAGGACTTAGAGGAAGAAGAGGAAGGCGAAACTGAAGGAGGACAGAGAGAGG ATAGTGAAAGTGATGAGTACCCATTCGTAGAGGATTGGAAAAAAGCAAATGAGGAGCTGAAAAAGGAAGAGGAGGAAAAA CAAGAACAGCCTATCGTCTCATTACTCTCACCACAGAGGCTTGAGATGTACAGAAAGTTGAGTGAAGAAATGTTCTCTTA CTGTCCAGAGATTAAGCAATTATATGATGAAAAGAAGCTCAGTGATGATAACATAATAACTCTGGCGGAGGTATGGAGGA ACTTTCAAATAGCGTTCAAAAACTTGTCCCTGAACTGGCACAGTGTAGCTGAAGAAGTCCTAAGTCCTTATCTGGATAAG ACGCAACTGGAGGATCTATTCTATAAGTTTGTAAAGGGGACTATGAAGCTCTACCCGAGAGAGGAGTTTGAGGTGTTAAA ATGA
Upstream 100 bases:
>100_bases GTTAACTGGGGAGTTTACTGTATAAAAATAATTCAATGTTTGCAAAATACTGGAAATCTTAAAATATACAAAAAGAGATT TTCTAATAATAGGTGATATC
Downstream 100 bases:
>100_bases CTGCAAGGGTTATCGCAATACATAATTTTAAGGGAGGAGTAGGAAAGACTACGCTTACAGCAGTCTTAGGACTAGGGCTA GCAGTAAACCATAGAGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Nuclease
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVILDGYTRVSIMKNLNFKEVKVR KWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIAEKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQV KEEIGTKEVNDSEIKEYSLINTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEYPFVEDWKKANEELKKEEEEK QEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKLSDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDK TQLEDLFYKFVKGTMKLYPREEFEVLK
Sequences:
>Translated_427_residues MSHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVILDGYTRVSIMKNLNFKEVKVR KWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIAEKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQV KEEIGTKEVNDSEIKEYSLINTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEYPFVEDWKKANEELKKEEEEK QEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKLSDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDK TQLEDLFYKFVKGTMKLYPREEFEVLK >Mature_426_residues SHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVILDGYTRVSIMKNLNFKEVKVRK WNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIAEKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQVK EEIGTKEVNDSEIKEYSLINTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDDL LTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEYPFVEDWKKANEELKKEEEEKQ EQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKLSDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDKT QLEDLFYKFVKGTMKLYPREEFEVLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50160; Mature: 50029
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVIL CCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEE DGYTRVSIMKNLNFKEVKVRKWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIA CCCHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQVKEEIGTKEVNDSEIKEYSLI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHH LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCC PFVEDWKKANEELKKEEEEKQEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKL CCHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDKTQLEDLFYKFVKGTMKLYPR CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EEFEVLK HHHHHCC >Mature Secondary Structure SHGNTLSYSEEVIPIEKLKEDEEFKSLVPPNNMKEQLASSIAKNGQTLPIDVDEDYVIL CCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEE DGYTRVSIMKNLNFKEVKVRKWNFKSSEDRATAYRLIAMLNLQRRHLDKNEVLKLLREIA CCCHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EKILKISEEGQKFGANAPNFEQKGETNIRPSMLEMTMKQVKEEIGTKEVNDSEIKEYSLI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NTIPYLRQLVDDKKLSVRTAYELYKKAKDKLQKIASLPPTERNQLLTTREGRKIILERDD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEHHH LLTQILEHRLAVSQAINKLKTEEKLAKSKRKSRVEKEDLEEEEEGETEGGQREDSESDEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCCC PFVEDWKKANEELKKEEEEKQEQPIVSLLSPQRLEMYRKLSEEMFSYCPEIKQLYDEKKL CCHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SDDNIITLAEVWRNFQIAFKNLSLNWHSVAEEVLSPYLDKTQLEDLFYKFVKGTMKLYPR CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EEFEVLK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA