Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15921589
Identifier: 15921589
GI number: 15921589
Start: 1320561
End: 1322420
Strand: Direct
Name: 15921589
Synonym: ST1312
Alternate gene names: NA
Gene position: 1320561-1322420 (Clockwise)
Preceding gene: 15921586
Following gene: 15921590
Centisome position: 49.0
GC content: 45.11
Gene sequence:
>1860_bases ATGATGAAGGGACAAACTCAGGCTAAAACTAAAAAGAAAGTAGAAGAGAAGGTCTACGAACTGGAGCCAGGTCCGTTCGA ACTCTTAGATGATAATGAAAGGGACAGGCTAGAAGGGGAATTTCAGGGGTTGTTGAACTTAGTAGACAGAGGTACTATTG TTGTAGTAAGTAAGCAGGGCGAATACGAGTACGAAAACGAAAAGTATCCTATCATATATAATAAGTTCCTTCTTATTACG GCCACAGAGCTGCAGTACAACCAGACCAAATTAGAGAGGCCCAGGATCGTAAAGACGCACCCGGACTATGTCGAGCTAGA GAACGGACTTCTTGCTCAAAGTGCTGTATTCTACCGCTTTCCAGACATTGTACCAGAAGGCTTCTTAGCCGAATACTTTG GACTCGGGGACGTCGTTTTCAAATGGGAAGCGCTGGATCCCGTATCTGCCGCTTCGGCTATTGATAGAACGAGAAAGAGA TTAGAAAGCTCCAGCTCTAACGATAGTTTCACGATAAGGAAATTACAGAAGGTTACGCAGCTACAGGGCATAATAGGAGG ACAGGCAAAGTTGCTGCGCTTTTGGGTCTACATAACGTACTACGGCGAGACAAAAGGTGAACTTAAAAACAAGTTTAATC AAATAAGAGCAATTGCGAAGAGTCGTCTGTTCGACATCGATATTCCTAAATTTTATCAAGGGGCTCTCTACAACTTCAGG ACAGATGTAGACTTCTTTGTCCCGTTCTACAACTCTGTTAGGCCTCACTACGTAGACACTATTACAGCCTCATGGCAGTT TTACCCTCTAATCAGCGAGGACCTTATCGACGAGGGAGGCATCTTTCTGGGCTTCAGCGACTCTGGGTCACCGGTGGTCT TCAATCCTTATCGTAGAGCTAACTACAACATGATCATTTTGGGCGAGACGGGATCCGGCAAGAGCATGACGGCAAAAATC TTCTTAAAGAGGATGAAGAAACAATTTAACATCAAAATTTGGGGTATTGATCCAGAAAATGAGTACGTAAAAGTGAGCAC TGCATTAGGAGTTAAGGGAGTAGTAGTGAAGAAGAACATGACGCTAGGCTTAGACCCGTTCAAGCTTTCTAGGATAGAGA CCGAAGAAGGACGTTTAATTGATGTCGAGGACATTGCAGAGCTGCTTGCGGATTTCTATTTGCCAAACGACATAGCTCTT AGGAATAGGCTGAGGGCATTAGTAGACGATTACAAGGACTCGGAAAGCGTATTTGAGTTTGTTGAGAGAGTTCGGAAGGA GGACCCAGAGGTAGGAAAATACCTTGATGCTATAAACTCCCCGCCAGATTCTTACATCTTCGACGGGGACGTTAGTATCA GTGATAATATTGTATTTGGTTTAAAGGAAATCAGTGGGACTGGCGCCTCAAGGCTGAAAGCGTTGATCACTACATTGCTC ACTATCATATACCAGAAGCTGATGTTTTCCAACAAAGAGAAAGGCTACCTGTTCATTGACGAGGCATGGCTCTTCGTTAA CTACCCTGTCACGATGTCGCTATTAGAAAACATTTCACGTAGGGCCAGGAAGTACAACAAGGGCTTGCTGTTCGTAACGC AGAAACCAGCGGACGTGGCAGGGAACGAGGCTGGGAGGACGATTTTGGAGCAGAGCGCTACCGTATTGCTCTTGAGGCAA AAGAAGGCAGGTATTGAGGTCTTACAAAAGGTCTACGGGATAAGGCAACAGGAAGCTGAGGCACTACTAAACGTAGATCC AGGCCATGGAATTCTTAGAACAGGGAACTACTTACTTAGATTATACATTCAGCCTAGCAGTGAGGAGTTCGAAGCGTTCA GAACCACGGGTGAGTGGTGA
Upstream 100 bases:
>100_bases ATTTGAAGTAGAATGGTTCCATTTTCCTCAAAATAAAAAAGGCAAATGTTTAAATAGACAGGGAGGGAGGGGGCACTATT TAAACTTTAGCTAATCTTTT
Downstream 100 bases:
>100_bases TGAAGAAGAGAGCTATAATAACATATGTATCAGAGGACATATACGAAAAGCTAACTAAGATTGCAGAGAGCAAGCAAAGC TCGATATCGCAAGTAGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Secretory Pathway VirB4 Protein-Like Protein; TrbE Protein; Type IV Secretory Pathway VirB4 Components-Like Protein; Transfer Complex Protein; Aaa ATPase; Sex Pilus Assembly Protein; F-Pilin Subunit Assembly Into Extended F Pili; TraE-Like Protein; ATPase/Type IV Secretory Pathway Component; Type Iv Secretory Pathway Virb4 Protein-Like Protein
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MMKGQTQAKTKKKVEEKVYELEPGPFELLDDNERDRLEGEFQGLLNLVDRGTIVVVSKQGEYEYENEKYPIIYNKFLLIT ATELQYNQTKLERPRIVKTHPDYVELENGLLAQSAVFYRFPDIVPEGFLAEYFGLGDVVFKWEALDPVSAASAIDRTRKR LESSSSNDSFTIRKLQKVTQLQGIIGGQAKLLRFWVYITYYGETKGELKNKFNQIRAIAKSRLFDIDIPKFYQGALYNFR TDVDFFVPFYNSVRPHYVDTITASWQFYPLISEDLIDEGGIFLGFSDSGSPVVFNPYRRANYNMIILGETGSGKSMTAKI FLKRMKKQFNIKIWGIDPENEYVKVSTALGVKGVVVKKNMTLGLDPFKLSRIETEEGRLIDVEDIAELLADFYLPNDIAL RNRLRALVDDYKDSESVFEFVERVRKEDPEVGKYLDAINSPPDSYIFDGDVSISDNIVFGLKEISGTGASRLKALITTLL TIIYQKLMFSNKEKGYLFIDEAWLFVNYPVTMSLLENISRRARKYNKGLLFVTQKPADVAGNEAGRTILEQSATVLLLRQ KKAGIEVLQKVYGIRQQEAEALLNVDPGHGILRTGNYLLRLYIQPSSEEFEAFRTTGEW
Sequences:
>Translated_619_residues MMKGQTQAKTKKKVEEKVYELEPGPFELLDDNERDRLEGEFQGLLNLVDRGTIVVVSKQGEYEYENEKYPIIYNKFLLIT ATELQYNQTKLERPRIVKTHPDYVELENGLLAQSAVFYRFPDIVPEGFLAEYFGLGDVVFKWEALDPVSAASAIDRTRKR LESSSSNDSFTIRKLQKVTQLQGIIGGQAKLLRFWVYITYYGETKGELKNKFNQIRAIAKSRLFDIDIPKFYQGALYNFR TDVDFFVPFYNSVRPHYVDTITASWQFYPLISEDLIDEGGIFLGFSDSGSPVVFNPYRRANYNMIILGETGSGKSMTAKI FLKRMKKQFNIKIWGIDPENEYVKVSTALGVKGVVVKKNMTLGLDPFKLSRIETEEGRLIDVEDIAELLADFYLPNDIAL RNRLRALVDDYKDSESVFEFVERVRKEDPEVGKYLDAINSPPDSYIFDGDVSISDNIVFGLKEISGTGASRLKALITTLL TIIYQKLMFSNKEKGYLFIDEAWLFVNYPVTMSLLENISRRARKYNKGLLFVTQKPADVAGNEAGRTILEQSATVLLLRQ KKAGIEVLQKVYGIRQQEAEALLNVDPGHGILRTGNYLLRLYIQPSSEEFEAFRTTGEW >Mature_619_residues MMKGQTQAKTKKKVEEKVYELEPGPFELLDDNERDRLEGEFQGLLNLVDRGTIVVVSKQGEYEYENEKYPIIYNKFLLIT ATELQYNQTKLERPRIVKTHPDYVELENGLLAQSAVFYRFPDIVPEGFLAEYFGLGDVVFKWEALDPVSAASAIDRTRKR LESSSSNDSFTIRKLQKVTQLQGIIGGQAKLLRFWVYITYYGETKGELKNKFNQIRAIAKSRLFDIDIPKFYQGALYNFR TDVDFFVPFYNSVRPHYVDTITASWQFYPLISEDLIDEGGIFLGFSDSGSPVVFNPYRRANYNMIILGETGSGKSMTAKI FLKRMKKQFNIKIWGIDPENEYVKVSTALGVKGVVVKKNMTLGLDPFKLSRIETEEGRLIDVEDIAELLADFYLPNDIAL RNRLRALVDDYKDSESVFEFVERVRKEDPEVGKYLDAINSPPDSYIFDGDVSISDNIVFGLKEISGTGASRLKALITTLL TIIYQKLMFSNKEKGYLFIDEAWLFVNYPVTMSLLENISRRARKYNKGLLFVTQKPADVAGNEAGRTILEQSATVLLLRQ KKAGIEVLQKVYGIRQQEAEALLNVDPGHGILRTGNYLLRLYIQPSSEEFEAFRTTGEW
Specific function: Unknown
COG id: COG3451
COG function: function code U; Type IV secretory pathway, VirB4 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70803; Mature: 70803
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKGQTQAKTKKKVEEKVYELEPGPFELLDDNERDRLEGEFQGLLNLVDRGTIVVVSKQG CCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC EYEYENEKYPIIYNKFLLITATELQYNQTKLERPRIVKTHPDYVELENGLLAQSAVFYRF CCCCCCCCCCEEEEEEEEEEEECCCCCHHHCCCCCEEECCCCCEECCCCCCHHHHHHHCC PDIVPEGFLAEYFGLGDVVFKWEALDPVSAASAIDRTRKRLESSSSNDSFTIRKLQKVTQ CCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LQGIIGGQAKLLRFWVYITYYGETKGELKNKFNQIRAIAKSRLFDIDIPKFYQGALYNFR HHHHCCCHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHCCC TDVDFFVPFYNSVRPHYVDTITASWQFYPLISEDLIDEGGIFLGFSDSGSPVVFNPYRRA CCCEEEEEHHCCCCCCEEEEEEECEEEEECHHHHHHCCCCEEEEECCCCCCEEECCHHHC NYNMIILGETGSGKSMTAKIFLKRMKKQFNIKIWGIDPENEYVKVSTALGVKGVVVKKNM CCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCEEEEEECCC TLGLDPFKLSRIETEEGRLIDVEDIAELLADFYLPNDIALRNRLRALVDDYKDSESVFEF EECCCCCEECEEECCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH VERVRKEDPEVGKYLDAINSPPDSYIFDGDVSISDNIVFGLKEISGTGASRLKALITTLL HHHHHHCCCHHHHHHHHHCCCCCCEEECCCCEECCCEEEEEHHHCCCCHHHHHHHHHHHH TIIYQKLMFSNKEKGYLFIDEAWLFVNYPVTMSLLENISRRARKYNKGLLFVTQKPADVA HHHHHHHHHCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC GNEAGRTILEQSATVLLLRQKKAGIEVLQKVYGIRQQEAEALLNVDPGHGILRTGNYLLR CCHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHEECCCCCCEEECCCEEEE LYIQPSSEEFEAFRTTGEW EEECCCCHHHHHHHCCCCC >Mature Secondary Structure MMKGQTQAKTKKKVEEKVYELEPGPFELLDDNERDRLEGEFQGLLNLVDRGTIVVVSKQG CCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC EYEYENEKYPIIYNKFLLITATELQYNQTKLERPRIVKTHPDYVELENGLLAQSAVFYRF CCCCCCCCCCEEEEEEEEEEEECCCCCHHHCCCCCEEECCCCCEECCCCCCHHHHHHHCC PDIVPEGFLAEYFGLGDVVFKWEALDPVSAASAIDRTRKRLESSSSNDSFTIRKLQKVTQ CCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LQGIIGGQAKLLRFWVYITYYGETKGELKNKFNQIRAIAKSRLFDIDIPKFYQGALYNFR HHHHCCCHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHCCC TDVDFFVPFYNSVRPHYVDTITASWQFYPLISEDLIDEGGIFLGFSDSGSPVVFNPYRRA CCCEEEEEHHCCCCCCEEEEEEECEEEEECHHHHHHCCCCEEEEECCCCCCEEECCHHHC NYNMIILGETGSGKSMTAKIFLKRMKKQFNIKIWGIDPENEYVKVSTALGVKGVVVKKNM CCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCEEEEEECCC TLGLDPFKLSRIETEEGRLIDVEDIAELLADFYLPNDIALRNRLRALVDDYKDSESVFEF EECCCCCEECEEECCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH VERVRKEDPEVGKYLDAINSPPDSYIFDGDVSISDNIVFGLKEISGTGASRLKALITTLL HHHHHHCCCHHHHHHHHHCCCCCCEEECCCCEECCCEEEEEHHHCCCCHHHHHHHHHHHH TIIYQKLMFSNKEKGYLFIDEAWLFVNYPVTMSLLENISRRARKYNKGLLFVTQKPADVA HHHHHHHHHCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC GNEAGRTILEQSATVLLLRQKKAGIEVLQKVYGIRQQEAEALLNVDPGHGILRTGNYLLR CCHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHEECCCCCCEEECCCEEEE LYIQPSSEEFEAFRTTGEW EEECCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA