Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15921380
Identifier: 15921380
GI number: 15921380
Start: 1117727
End: 1119442
Strand: Direct
Name: 15921380
Synonym: ST1124
Alternate gene names: NA
Gene position: 1117727-1119442 (Clockwise)
Preceding gene: 15921378
Following gene: 15921384
Centisome position: 41.48
GC content: 35.96
Gene sequence:
>1716_bases GTGAAATTAGGTTTTATCTCAAACCAGATAACCTCTGCAATTATACAAGGTACTTCAATAGTTTGGTTTCCAGTTCCTAA GTTTGATTCTTCTTCAATATTTGCTAGGCTACTAGATGAAGACGGGGGAGAGTTCTCTATAGTAGTGAAGAAAGAATCTC AAATAAAGCAGTATTATGAACATCCTTTGGTGTTAACTACAGAAGTTTATACAGAAAAAGGAATGATTAAAATTACTGAT TTATTACCCTTAGGTGAAACTGTAATAATAAGAAAGGTTGAAAGTGAAGTTCCATTTTCAGTAGTTTTCAAACCCTTCTT TAGATACGCGTTGTACAGACCAATAATACTAAAGGATAGGTTTATCAACTCTAAGGGTAGGGATTGCGTGGCTTTTCTCT ATAGCTGGGATGGAAAAGTTAAAAGGGAAGGGCCTTTCACCTGGAAGTTTTCTGAAGGGAAGGGATTTTTAGTAGCTAAT TATTCTACAGATGTGGAGCACGGAGCTTTAAGTGAAAGAGGGAAGAATTTAAGATTAGATTTTGAGAAGCCTTTCGAGAA AACTATAAAATATTGGGAAAGTTTTGAAGTTAAGTCAAGCATATATGAAGACCTTTACAAATCATCTGTTTTCGTTCTTT TAGGTTCAATTTATTCTCCTTCTGGAGCATCAATTGCAGCCCCCACTACTTCTTTACCCGAAGTTGTTGGAGGTTCAAGA AATTGGGATTATAGATTTGCTTGGGTTAGAGATTCGTCAATTACGGCTGAGGCATTGATTAATGCAGGGTTTATTGTAGA GGCTAGAAGGATAATCAATTTCCTTCTATCCTTGATCAATTTCACGTCAAAACCTTTCTATTATCCTTTATATACTATAG AAGGTACAATACCTCCACCAGAAGTTAAATTAATGTGGTTATCTGGATATAAGAACTCGAAACCCGTTAGAATAGGCAAT GCTGCATCAAAACAAATACAACTTGATGTGGAGGGATTCTTCTTAAACGCACTTTATAAATACTTTGAAAAAACCGGAGA CATTGTGTATGTAAAGGAGGTATTTGATAAAGTTGAATATATTGCAGATTGGGTTTCCGAAAACTGGTTATTAAAGGACT CAGGAATATGGGAGGACAGAGGTGAACCCAGGCATTATACGCACTCTAAGATAATGATGTGGGTAGCCTTAGATAGAGCT GGGAAACTCGCAGAACATATAGGCAAAGAAGATAGATGGAGAGAAAGTAGAGAATCATTGAGGAAATGGATTTTAGAAAA CTGTGTAACGAATGGTTATTTTGCAAGATTTGCTGGAAGCGAAGACGTTGATTCATCAATACTTTCCGCACCTCTATACG GTTTTGTGAACGAAAGAGATATGCTGTTCTTAAACACTTTGTCCAAGATAGAGAAGGAACTTAAAGTCGGTAACTTCGTT AAGAGATATAAGACCGATTTTATGGGAGAAGCTAAACATCCGTTTCTTCTAACTACATTATGGTTAGCCAGAGTTTATGT AAGGCTAGGAAGAATTGAAGAAGCAAAGAATATAATCTCTAATATAGAAGAGATAGCAGGGAACTTAAAGCTTATAGGAG AACATGCAGATGTTGAGAAGAAAGAATTTACTGGTAATTTCCCTCAAGTCTTTGTACATGCCGAAATTATCAACTTAGTT AAGGAGCTTGAGGGGAATAAGAATAATGTAACATGA
Upstream 100 bases:
>100_bases TTCTCAATATTTCCTCTTTTTCACTCATATATTAACTACTGAATTAACGAAAATAAAGGTTTTAGGAAAGGTATTTATTT TACAAACTAGAATTTCATAC
Downstream 100 bases:
>100_bases TTACTAGCGAAAGTAAAGAGTTAAATCTTCAAACAGAAATTCTTTGCCTTTGCGTCTAATTATGAAAGCATAAATAACTT GAGATTTTTATATTCCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Trehalose-Phosphatase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glycosyl Hydrolase Glucoamylase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glycoside Hydrolase/Transferase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Trehalose 6-Phosphatase; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MKLGFISNQITSAIIQGTSIVWFPVPKFDSSSIFARLLDEDGGEFSIVVKKESQIKQYYEHPLVLTTEVYTEKGMIKITD LLPLGETVIIRKVESEVPFSVVFKPFFRYALYRPIILKDRFINSKGRDCVAFLYSWDGKVKREGPFTWKFSEGKGFLVAN YSTDVEHGALSERGKNLRLDFEKPFEKTIKYWESFEVKSSIYEDLYKSSVFVLLGSIYSPSGASIAAPTTSLPEVVGGSR NWDYRFAWVRDSSITAEALINAGFIVEARRIINFLLSLINFTSKPFYYPLYTIEGTIPPPEVKLMWLSGYKNSKPVRIGN AASKQIQLDVEGFFLNALYKYFEKTGDIVYVKEVFDKVEYIADWVSENWLLKDSGIWEDRGEPRHYTHSKIMMWVALDRA GKLAEHIGKEDRWRESRESLRKWILENCVTNGYFARFAGSEDVDSSILSAPLYGFVNERDMLFLNTLSKIEKELKVGNFV KRYKTDFMGEAKHPFLLTTLWLARVYVRLGRIEEAKNIISNIEEIAGNLKLIGEHADVEKKEFTGNFPQVFVHAEIINLV KELEGNKNNVT
Sequences:
>Translated_571_residues MKLGFISNQITSAIIQGTSIVWFPVPKFDSSSIFARLLDEDGGEFSIVVKKESQIKQYYEHPLVLTTEVYTEKGMIKITD LLPLGETVIIRKVESEVPFSVVFKPFFRYALYRPIILKDRFINSKGRDCVAFLYSWDGKVKREGPFTWKFSEGKGFLVAN YSTDVEHGALSERGKNLRLDFEKPFEKTIKYWESFEVKSSIYEDLYKSSVFVLLGSIYSPSGASIAAPTTSLPEVVGGSR NWDYRFAWVRDSSITAEALINAGFIVEARRIINFLLSLINFTSKPFYYPLYTIEGTIPPPEVKLMWLSGYKNSKPVRIGN AASKQIQLDVEGFFLNALYKYFEKTGDIVYVKEVFDKVEYIADWVSENWLLKDSGIWEDRGEPRHYTHSKIMMWVALDRA GKLAEHIGKEDRWRESRESLRKWILENCVTNGYFARFAGSEDVDSSILSAPLYGFVNERDMLFLNTLSKIEKELKVGNFV KRYKTDFMGEAKHPFLLTTLWLARVYVRLGRIEEAKNIISNIEEIAGNLKLIGEHADVEKKEFTGNFPQVFVHAEIINLV KELEGNKNNVT >Mature_571_residues MKLGFISNQITSAIIQGTSIVWFPVPKFDSSSIFARLLDEDGGEFSIVVKKESQIKQYYEHPLVLTTEVYTEKGMIKITD LLPLGETVIIRKVESEVPFSVVFKPFFRYALYRPIILKDRFINSKGRDCVAFLYSWDGKVKREGPFTWKFSEGKGFLVAN YSTDVEHGALSERGKNLRLDFEKPFEKTIKYWESFEVKSSIYEDLYKSSVFVLLGSIYSPSGASIAAPTTSLPEVVGGSR NWDYRFAWVRDSSITAEALINAGFIVEARRIINFLLSLINFTSKPFYYPLYTIEGTIPPPEVKLMWLSGYKNSKPVRIGN AASKQIQLDVEGFFLNALYKYFEKTGDIVYVKEVFDKVEYIADWVSENWLLKDSGIWEDRGEPRHYTHSKIMMWVALDRA GKLAEHIGKEDRWRESRESLRKWILENCVTNGYFARFAGSEDVDSSILSAPLYGFVNERDMLFLNTLSKIEKELKVGNFV KRYKTDFMGEAKHPFLLTTLWLARVYVRLGRIEEAKNIISNIEEIAGNLKLIGEHADVEKKEFTGNFPQVFVHAEIINLV KELEGNKNNVT
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65604; Mature: 65604
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGFISNQITSAIIQGTSIVWFPVPKFDSSSIFARLLDEDGGEFSIVVKKESQIKQYYE CCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHC HPLVLTTEVYTEKGMIKITDLLPLGETVIIRKVESEVPFSVVFKPFFRYALYRPIILKDR CCEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEHH FINSKGRDCVAFLYSWDGKVKREGPFTWKFSEGKGFLVANYSTDVEHGALSERGKNLRLD HCCCCCCCEEEEEEECCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCHHHCCCCEEEC FEKPFEKTIKYWESFEVKSSIYEDLYKSSVFVLLGSIYSPSGASIAAPTTSLPEVVGGSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCHHHHCCCC NWDYRFAWVRDSSITAEALINAGFIVEARRIINFLLSLINFTSKPFYYPLYTIEGTIPPP CCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC EVKLMWLSGYKNSKPVRIGNAASKQIQLDVEGFFLNALYKYFEKTGDIVYVKEVFDKVEY CEEEEEEECCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH IADWVSENWLLKDSGIWEDRGEPRHYTHSKIMMWVALDRAGKLAEHIGKEDRWRESRESL HHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHCCCCHHHHHHHHHH RKWILENCVTNGYFARFAGSEDVDSSILSAPLYGFVNERDMLFLNTLSKIEKELKVGNFV HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KRYKTDFMGEAKHPFLLTTLWLARVYVRLGRIEEAKNIISNIEEIAGNLKLIGEHADVEK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH KEFTGNFPQVFVHAEIINLVKELEGNKNNVT HHHCCCCCCEEHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLGFISNQITSAIIQGTSIVWFPVPKFDSSSIFARLLDEDGGEFSIVVKKESQIKQYYE CCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHC HPLVLTTEVYTEKGMIKITDLLPLGETVIIRKVESEVPFSVVFKPFFRYALYRPIILKDR CCEEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEHH FINSKGRDCVAFLYSWDGKVKREGPFTWKFSEGKGFLVANYSTDVEHGALSERGKNLRLD HCCCCCCCEEEEEEECCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCHHHCCCCEEEC FEKPFEKTIKYWESFEVKSSIYEDLYKSSVFVLLGSIYSPSGASIAAPTTSLPEVVGGSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCHHHHCCCC NWDYRFAWVRDSSITAEALINAGFIVEARRIINFLLSLINFTSKPFYYPLYTIEGTIPPP CCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC EVKLMWLSGYKNSKPVRIGNAASKQIQLDVEGFFLNALYKYFEKTGDIVYVKEVFDKVEY CEEEEEEECCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH IADWVSENWLLKDSGIWEDRGEPRHYTHSKIMMWVALDRAGKLAEHIGKEDRWRESRESL HHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHCCCCHHHHHHHHHH RKWILENCVTNGYFARFAGSEDVDSSILSAPLYGFVNERDMLFLNTLSKIEKELKVGNFV HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH KRYKTDFMGEAKHPFLLTTLWLARVYVRLGRIEEAKNIISNIEEIAGNLKLIGEHADVEK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH KEFTGNFPQVFVHAEIINLVKELEGNKNNVT HHHCCCCCCEEHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA