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The map label for this gene is ganQ [H]

Identifier: 15921360

GI number: 15921360

Start: 1091052

End: 1091945

Strand: Direct

Name: ganQ [H]

Synonym: ST1105

Alternate gene names: 15921360

Gene position: 1091052-1091945 (Clockwise)

Preceding gene: 15921359

Following gene: 15921361

Centisome position: 40.49

GC content: 34.12

Gene sequence:

>894_bases
GTGAGTAGCATGATTAGTGTTAGGAAAAAATACAAAATTTCTAAAATTATAAGATTAGCAATATCATATTTTATCTTATT
AGTTATGGCATTTTTCTCTATCTTCCCATTATATTATGTTTTCATGACATCATTCAGCAACTCCCCAAGCTTAATATCTC
TTAGTATATCAACATTATTACCTAAACATATATATTTCACAGCATATAAGGAGTTACTCTCAGCAAATTTATATGGTGGT
ACTTTTCCTCTATGGATTAGAAATAGCTTAATTCTAGCAGGATCTACCGCAATAATTTCAGTACTATTAGCATTAATAAC
TGGATATGCATTATCAAGATTAAATATACCAGCTAAGAAAATCTTGGCTACATTCATTTATATTGTAACATTCTTTCCTT
ATACTGCTACAGCAGTACCCTTATATTTATTATTCGCTAAACTTCACTTACTTAACTATATTGGTTTAATACTAGCATAT
ACTCCCGGAACCTCAATCTTTGCCGCTTTCATAGCAAAACTAAGTATAGACGCTATCCCGTCTTCTTACGAGGAGATCGC
AATGGTAGATGGACTATCAAGATTTGGGGCATTTTTAAGGATTATAATGAGACTAGCTTTGCCCGTAGTGGCTTTAACCG
CAATATTGGGATTCAGTGGCGCTTATTTAGATTTTGCTTTGGCTTACTCCTTCTTACTACCTAATGTGAAAGCATGGACT
GCAACAATAGGTCTTTATTACATGGCCGGGCTATTAAATCCTGCTAGTGCACCAGCATATAATATATTTGCTGCAGGTGC
AGTAATAATGGGTATACCTCTAATGGCATTATTTATAGTCTCCCAAAGAATGATGACACGTGCATATAGTAGTTTAGCTG
GGGTGAAACAATGA

Upstream 100 bases:

>100_bases
TCTTTAGCGGCGGCTTGGTCTGTAATTTCCACTATTTTTGTTATAGTTCTTGCTATAATTGTAATTAAGTATACACACAT
TTTAGATTCATTTACATGAG

Downstream 100 bases:

>100_bases
GTTATGTTAAATTAGAAGATATTTGGAAGGAGTATGAGTCAAAAGGAAAGAAAGTAGAAGTATTAAGAGGATTAAACCTA
GATATAGAGAAAGGAGAATT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSSMISVRKKYKISKIIRLAISYFILLVMAFFSIFPLYYVFMTSFSNSPSLISLSISTLLPKHIYFTAYKELLSANLYGG
TFPLWIRNSLILAGSTAIISVLLALITGYALSRLNIPAKKILATFIYIVTFFPYTATAVPLYLLFAKLHLLNYIGLILAY
TPGTSIFAAFIAKLSIDAIPSSYEEIAMVDGLSRFGAFLRIIMRLALPVVALTAILGFSGAYLDFALAYSFLLPNVKAWT
ATIGLYYMAGLLNPASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSSLAGVKQ

Sequences:

>Translated_297_residues
MSSMISVRKKYKISKIIRLAISYFILLVMAFFSIFPLYYVFMTSFSNSPSLISLSISTLLPKHIYFTAYKELLSANLYGG
TFPLWIRNSLILAGSTAIISVLLALITGYALSRLNIPAKKILATFIYIVTFFPYTATAVPLYLLFAKLHLLNYIGLILAY
TPGTSIFAAFIAKLSIDAIPSSYEEIAMVDGLSRFGAFLRIIMRLALPVVALTAILGFSGAYLDFALAYSFLLPNVKAWT
ATIGLYYMAGLLNPASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSSLAGVKQ
>Mature_296_residues
SSMISVRKKYKISKIIRLAISYFILLVMAFFSIFPLYYVFMTSFSNSPSLISLSISTLLPKHIYFTAYKELLSANLYGGT
FPLWIRNSLILAGSTAIISVLLALITGYALSRLNIPAKKILATFIYIVTFFPYTATAVPLYLLFAKLHLLNYIGLILAYT
PGTSIFAAFIAKLSIDAIPSSYEEIAMVDGLSRFGAFLRIIMRLALPVVALTAILGFSGAYLDFALAYSFLLPNVKAWTA
TIGLYYMAGLLNPASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSSLAGVKQ

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=299, Percent_Identity=30.4347826086957, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=27.7153558052434, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32596; Mature: 32464

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSMISVRKKYKISKIIRLAISYFILLVMAFFSIFPLYYVFMTSFSNSPSLISLSISTLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH
PKHIYFTAYKELLSANLYGGTFPLWIRNSLILAGSTAIISVLLALITGYALSRLNIPAKK
HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHH
ILATFIYIVTFFPYTATAVPLYLLFAKLHLLNYIGLILAYTPGTSIFAAFIAKLSIDAIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
SSYEEIAMVDGLSRFGAFLRIIMRLALPVVALTAILGFSGAYLDFALAYSFLLPNVKAWT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH
ATIGLYYMAGLLNPASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSSLAGVKQ
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSMISVRKKYKISKIIRLAISYFILLVMAFFSIFPLYYVFMTSFSNSPSLISLSISTLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH
PKHIYFTAYKELLSANLYGGTFPLWIRNSLILAGSTAIISVLLALITGYALSRLNIPAKK
HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHH
ILATFIYIVTFFPYTATAVPLYLLFAKLHLLNYIGLILAYTPGTSIFAAFIAKLSIDAIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
SSYEEIAMVDGLSRFGAFLRIIMRLALPVVALTAILGFSGAYLDFALAYSFLLPNVKAWT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH
ATIGLYYMAGLLNPASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSSLAGVKQ
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]