Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15921351
Identifier: 15921351
GI number: 15921351
Start: 1078447
End: 1078773
Strand: Direct
Name: 15921351
Synonym: ST1097
Alternate gene names: NA
Gene position: 1078447-1078773 (Clockwise)
Preceding gene: 15921350
Following gene: 15921352
Centisome position: 40.02
GC content: 41.9
Gene sequence:
>327_bases ATGAAGAGGACTAACGTAGTTAAACTAATAGTAGACAAGCAAACCCACGAAAGACTGAAGGAGTTGGCTATTACCACAGC GAAGTGTTGGAACGAAGTGAACTGGTTAAGGATGCAACAGTTCAAGGAAGGGGAGAGAGTAGACTTTGCTAAGACAGAAA AGGAGGTGTACGAGAAGTACAAACACGTGTTAAAGGTTAACGTTCAACAAGTTGCTAGAAAGAACGCTGAGGACTGGAGA AGCTTCTTCTCCCTAATCGAAGAGAAGAATGAGGGAAAATTACCAAAGTGGTTTAAACCAAGACCTCCAAGGGTATTGGA AAGATAA
Upstream 100 bases:
>100_bases AACGGGAAGCTATGGACTAGAAGCTACTTCGTATCTACCGCAGGTAACGTATCCAGCGAGACGATAAAGAAGTACATTGA AGAACAGTGGGCGAAAGAGA
Downstream 100 bases:
>100_bases AAGTGGAAAATATAAACTAATCCTAATCATTAGGAACGATCGTTATGAGGTGGATGAGAACAAGAGGATCATCTATTTGA AGGACTTCAAACTCTCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: IS Element ISTsi3 OrfB Probably Transposase; Neutral Protease; Transposase ISC; IS Element ISDka2 OrfB
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKRTNVVKLIVDKQTHERLKELAITTAKCWNEVNWLRMQQFKEGERVDFAKTEKEVYEKYKHVLKVNVQQVARKNAEDWR SFFSLIEEKNEGKLPKWFKPRPPRVLER
Sequences:
>Translated_108_residues MKRTNVVKLIVDKQTHERLKELAITTAKCWNEVNWLRMQQFKEGERVDFAKTEKEVYEKYKHVLKVNVQQVARKNAEDWR SFFSLIEEKNEGKLPKWFKPRPPRVLER >Mature_108_residues MKRTNVVKLIVDKQTHERLKELAITTAKCWNEVNWLRMQQFKEGERVDFAKTEKEVYEKYKHVLKVNVQQVARKNAEDWR SFFSLIEEKNEGKLPKWFKPRPPRVLER
Specific function: Unknown
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13143; Mature: 13143
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTNVVKLIVDKQTHERLKELAITTAKCWNEVNWLRMQQFKEGERVDFAKTEKEVYEKY CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KHVLKVNVQQVARKNAEDWRSFFSLIEEKNEGKLPKWFKPRPPRVLER HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MKRTNVVKLIVDKQTHERLKELAITTAKCWNEVNWLRMQQFKEGERVDFAKTEKEVYEKY CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH KHVLKVNVQQVARKNAEDWRSFFSLIEEKNEGKLPKWFKPRPPRVLER HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA