Click here to switch to the map view.

The map label for this gene is 15921339

Identifier: 15921339

GI number: 15921339

Start: 1068658

End: 1069092

Strand: Direct

Name: 15921339

Synonym: ST1086

Alternate gene names: NA

Gene position: 1068658-1069092 (Clockwise)

Preceding gene: 15921338

Following gene: 15921343

Centisome position: 39.66

GC content: 32.87

Gene sequence:

>435_bases
GTGAGGGCGAGAAATGTGTCAGATGCATGGAAACGATTCTCTCTATTATCTGATTTATTAGAGCTCTACAAAAATGAGGA
AACACAATTTAAAGAGTACGTTTCCTATTTATGCGAGAGAAATTACACAGTAATACTCTTCGGTTCTAGAGCTAGGGGTG
ATTACAAAATTTATAGTGATTACGATCTTTTAGTTATAGGCGAAGAAATGCCAAAACTTCCACCAACCGATGCAATAGAA
CTTCATTTTGTTAAGAAAGAAAAACTGGAAGATAAAATACGTGAGTTTAATACTATTGTTATTGATGCTTTTTACGAAGG
CAAAGTAATCTGTGATAAACTTAATATTTATGAAGATAATAAAAGAAAAGTTCTTGAGAAGATTAAGGGACTTAAGAGGG
TTAAAGAAGGATGGGTTAGAGAAAACCAACACTAA

Upstream 100 bases:

>100_bases
CTCCAACTAAACGATAAAATACTTGATTGTGCTAACTATCTCTCCCTAATGTATTTAGGCTCTAGGTATCCAGAAGAGGA
GATAATCGATATGGATAGGA

Downstream 100 bases:

>100_bases
ATTTCCGTGATAAATTAAGGTAATTACATGAATATCGCTTTGTGAACAATAGTATATTATACTTTAAGAAAATTTCAAGA
TAAAAAGGATGTGTTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Beta Domain-Containing Protein; DNA Polymerase Beta Domain Protein Region

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRARNVSDAWKRFSLLSDLLELYKNEETQFKEYVSYLCERNYTVILFGSRARGDYKIYSDYDLLVIGEEMPKLPPTDAIE
LHFVKKEKLEDKIREFNTIVIDAFYEGKVICDKLNIYEDNKRKVLEKIKGLKRVKEGWVRENQH

Sequences:

>Translated_144_residues
MRARNVSDAWKRFSLLSDLLELYKNEETQFKEYVSYLCERNYTVILFGSRARGDYKIYSDYDLLVIGEEMPKLPPTDAIE
LHFVKKEKLEDKIREFNTIVIDAFYEGKVICDKLNIYEDNKRKVLEKIKGLKRVKEGWVRENQH
>Mature_144_residues
MRARNVSDAWKRFSLLSDLLELYKNEETQFKEYVSYLCERNYTVILFGSRARGDYKIYSDYDLLVIGEEMPKLPPTDAIE
LHFVKKEKLEDKIREFNTIVIDAFYEGKVICDKLNIYEDNKRKVLEKIKGLKRVKEGWVRENQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17234; Mature: 17234

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARNVSDAWKRFSLLSDLLELYKNEETQFKEYVSYLCERNYTVILFGSRARGDYKIYSD
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECC
YDLLVIGEEMPKLPPTDAIELHFVKKEKLEDKIREFNTIVIDAFYEGKVICDKLNIYEDN
CEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCEEEEEEEECCEEEEEECCCCCCH
KRKVLEKIKGLKRVKEGWVRENQH
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRARNVSDAWKRFSLLSDLLELYKNEETQFKEYVSYLCERNYTVILFGSRARGDYKIYSD
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECC
YDLLVIGEEMPKLPPTDAIELHFVKKEKLEDKIREFNTIVIDAFYEGKVICDKLNIYEDN
CEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCEEEEEEEECCEEEEEECCCCCCH
KRKVLEKIKGLKRVKEGWVRENQH
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA