| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is coaBC [H]
Identifier: 15920445
GI number: 15920445
Start: 274352
End: 275590
Strand: Reverse
Name: coaBC [H]
Synonym: ST0257
Alternate gene names: 15920445
Gene position: 275590-274352 (Counterclockwise)
Preceding gene: 15920447
Following gene: 15920444
Centisome position: 10.23
GC content: 31.88
Gene sequence:
>1239_bases ATGGTTATTCATCCCTCGAAGAAAATTATAGGCGAGATCTCATCAGAACTTTTGAATAAGAAAATTTTAGTAGGAGTCAC AGGTAGTGTATCCATTTATAAGACTATTGACTTAGTGAGAAGCTTAATGAGGTTAGGTGCAGAAGTCCAAGTTATTATGA GTAAAGACGCTTCAAAATTAGTCTCTCCTACAATGTTTGAATGGGCAACTGGTAATCCAGTGATAACAAAAATTTCTGGC GGGATAGAACATGTTACATTAGCTGAAGATTATGACGCATATGTTGTAGCACCAGCTACAGCAAATACTATAAGCAAAAT TGTTAATGGAATTGCAGATACTCCAATAACAGTTACTGCTCTTAATTTTATTGGTCTAAAAAAACCTCTAATCTTAGTTC CAGCGATGCATTTACCAATGTATTTTACACCTCAAATGATAAATAATATAAATAAACTAAATGAGATAGGAGTAATTGTT GTAGAACCTTTTCTTGTAAGAGATGTTGCTCATTATCCAGATATAGAATATTTATCAAATTATATTTCAACCTTACTTCT TAGGGGTAAGGATTTAGAAGGATTGAAAATTGTCGTTACAGCTGGCCCTACAAGAGAGCATTTAGACCCAGTGAGATTTA TTTCAAATCCTAGTAGTGGGACTATGGGAGTTGCAATAGCAAACGAGGCATATTTTAGAGGTGCTGATGTTGTTTTAGTT CATGGTCCTTTAAGTACTCATATAAAGCCTTATGTTAAAAAGAAAGTTCAGGTAGAAACAACTGATGAAATGGCTAATGA AGTGAAGAAATTTGTAGAAACTGGATATAATATTGTGATTTTAGCTGGAGCACCAGCAGATTATAAGTTTAAAAACATTG CTTCTTCAAAGATTGATAGTCATACAGAAACTCCTACAGTAGAACTTGAAAAAACAGTAAAGATCTCAAGTATAATAAGG AAATATAATGTTTTCTTAGTAGGTTTTGCTGCAGAGACTGTAAAAGATGACAATGAATTAATAGAAAAAGGTAAAATAAA GAAGGAGAGGCATGGCTTTGATTTGCTAATAGCGAATAATGCTTCTAGAAAAGATATAGCATTTTCATCAGATTTTAATG AAGTTATAGTAATCGGAAACAATTTTATAAAGAAAATAAATAAAAATTATAAAACAGTTATAGCTAGAGAAATACTTGAC ATAGTTAAGCAAGAGTATAAGGTTCAAAAACATGGGTAA
Upstream 100 bases:
>100_bases TCTGTTAACCTTGCATTTCTTATTCTATATTCTTTTCCCTTTTTTGCTTCAGCAAACTCCATAATATAAGGTTTTTATTC GAAGTTTAAATTTATGTCTG
Downstream 100 bases:
>100_bases GCTTAAAAAATTGGAAGTTAGAAATAATAATGGGATTGGCTCGGGTAGCTCAGCCTGGTTAGAGCGACGGGCTGTGGACC CGTAGGTCCCGGGTTCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MVIHPSKKIIGEISSELLNKKILVGVTGSVSIYKTIDLVRSLMRLGAEVQVIMSKDASKLVSPTMFEWATGNPVITKISG GIEHVTLAEDYDAYVVAPATANTISKIVNGIADTPITVTALNFIGLKKPLILVPAMHLPMYFTPQMINNINKLNEIGVIV VEPFLVRDVAHYPDIEYLSNYISTLLLRGKDLEGLKIVVTAGPTREHLDPVRFISNPSSGTMGVAIANEAYFRGADVVLV HGPLSTHIKPYVKKKVQVETTDEMANEVKKFVETGYNIVILAGAPADYKFKNIASSKIDSHTETPTVELEKTVKISSIIR KYNVFLVGFAAETVKDDNELIEKGKIKKERHGFDLLIANNASRKDIAFSSDFNEVIVIGNNFIKKINKNYKTVIAREILD IVKQEYKVQKHG
Sequences:
>Translated_412_residues MVIHPSKKIIGEISSELLNKKILVGVTGSVSIYKTIDLVRSLMRLGAEVQVIMSKDASKLVSPTMFEWATGNPVITKISG GIEHVTLAEDYDAYVVAPATANTISKIVNGIADTPITVTALNFIGLKKPLILVPAMHLPMYFTPQMINNINKLNEIGVIV VEPFLVRDVAHYPDIEYLSNYISTLLLRGKDLEGLKIVVTAGPTREHLDPVRFISNPSSGTMGVAIANEAYFRGADVVLV HGPLSTHIKPYVKKKVQVETTDEMANEVKKFVETGYNIVILAGAPADYKFKNIASSKIDSHTETPTVELEKTVKISSIIR KYNVFLVGFAAETVKDDNELIEKGKIKKERHGFDLLIANNASRKDIAFSSDFNEVIVIGNNFIKKINKNYKTVIAREILD IVKQEYKVQKHG >Mature_412_residues MVIHPSKKIIGEISSELLNKKILVGVTGSVSIYKTIDLVRSLMRLGAEVQVIMSKDASKLVSPTMFEWATGNPVITKISG GIEHVTLAEDYDAYVVAPATANTISKIVNGIADTPITVTALNFIGLKKPLILVPAMHLPMYFTPQMINNINKLNEIGVIV VEPFLVRDVAHYPDIEYLSNYISTLLLRGKDLEGLKIVVTAGPTREHLDPVRFISNPSSGTMGVAIANEAYFRGADVVLV HGPLSTHIKPYVKKKVQVETTDEMANEVKKFVETGYNIVILAGAPADYKFKNIASSKIDSHTETPTVELEKTVKISSIIR KYNVFLVGFAAETVKDDNELIEKGKIKKERHGFDLLIANNASRKDIAFSSDFNEVIVIGNNFIKKINKNYKTVIAREILD IVKQEYKVQKHG
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=154, Percent_Identity=31.1688311688312, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI87082301, Length=421, Percent_Identity=32.0665083135392, Blast_Score=171, Evalue=6e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 45518; Mature: 45518
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIHPSKKIIGEISSELLNKKILVGVTGSVSIYKTIDLVRSLMRLGAEVQVIMSKDASKL CEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHH VSPTMFEWATGNPVITKISGGIEHVTLAEDYDAYVVAPATANTISKIVNGIADTPITVTA CCCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCEEEEE LNFIGLKKPLILVPAMHLPMYFTPQMINNINKLNEIGVIVVEPFLVRDVAHYPDIEYLSN EHHHCCCCCEEEEEHHHCCEEECHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCHHHHHH YISTLLLRGKDLEGLKIVVTAGPTREHLDPVRFISNPSSGTMGVAIANEAYFRGADVVLV HHHHHHHCCCCCCCEEEEEECCCCHHHCCHHHHHCCCCCCCEEEEEECCCEECCCCEEEE HGPLSTHIKPYVKKKVQVETTDEMANEVKKFVETGYNIVILAGAPADYKFKNIASSKIDS ECCHHHCCCHHHHHEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCC HTETPTVELEKTVKISSIIRKYNVFLVGFAAETVKDDNELIEKGKIKKERHGFDLLIANN CCCCCCEEHHHHHHHHHHHHHHCEEEEEEEHHHHCCCHHHHHHCCCCHHHCCEEEEEECC ASRKDIAFSSDFNEVIVIGNNFIKKINKNYKTVIAREILDIVKQEYKVQKHG CCCCCEEECCCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVIHPSKKIIGEISSELLNKKILVGVTGSVSIYKTIDLVRSLMRLGAEVQVIMSKDASKL CEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHH VSPTMFEWATGNPVITKISGGIEHVTLAEDYDAYVVAPATANTISKIVNGIADTPITVTA CCCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHCCCCEEEEE LNFIGLKKPLILVPAMHLPMYFTPQMINNINKLNEIGVIVVEPFLVRDVAHYPDIEYLSN EHHHCCCCCEEEEEHHHCCEEECHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCHHHHHH YISTLLLRGKDLEGLKIVVTAGPTREHLDPVRFISNPSSGTMGVAIANEAYFRGADVVLV HHHHHHHCCCCCCCEEEEEECCCCHHHCCHHHHHCCCCCCCEEEEEECCCEECCCCEEEE HGPLSTHIKPYVKKKVQVETTDEMANEVKKFVETGYNIVILAGAPADYKFKNIASSKIDS ECCHHHCCCHHHHHEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCC HTETPTVELEKTVKISSIIRKYNVFLVGFAAETVKDDNELIEKGKIKKERHGFDLLIANN CCCCCCEEHHHHHHHHHHHHHHCEEEEEEEHHHHCCCHHHHHHCCCCHHHCCEEEEEECC ASRKDIAFSSDFNEVIVIGNNFIKKINKNYKTVIAREILDIVKQEYKVQKHG CCCCCEEECCCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]