Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
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Accession | NC_003106 |
Length | 2,694,756 |
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The map label for this gene is 15920352
Identifier: 15920352
GI number: 15920352
Start: 198601
End: 198951
Strand: Reverse
Name: 15920352
Synonym: ST0173
Alternate gene names: NA
Gene position: 198951-198601 (Counterclockwise)
Preceding gene: 15920353
Following gene: 15920349
Centisome position: 7.38
GC content: 31.05
Gene sequence:
>351_bases ATGAGTATTGAAATTACTGAAAAAAGCGTAATTTTTAAGAGATTCCTTGCTGTAGCCTATGGACTATCAGAGGCAGAAAT AGAAGCTTTTCTTAAAATCATGGAAAGCAAAGAAGGTAAGAATGTTGATACAATTTCTAGTGAATTAGGAATTAGTAAAA GTAGAGCGAGTTTAATTCTTAAAAAACTTTCAGATGCTGGCTTGATTGAGAAGGAGAAAAGTGGAAATAATAAAGGGGGA AGACCAAAATTCATGTATTATGTTAACAAGGACGAAATAAGAACTAAATTAGAGAAAAAAGCTAATGAATTATGTGATCA ATTAAAGCAACTTATATCCTCTCTGGGTTAA
Upstream 100 bases:
>100_bases ATAATACAATACGTATAAAGTATAAAAAAGTTATTAGTCAGAATAGTGGTTAAATTTAAAAAATAGTTTATTTAATATTA AAGATGATAGGTGGTAAAAA
Downstream 100 bases:
>100_bases AAACTTCTTCAAAAATGGAGTTTCTTCAATTTTCTCTTTAGTTAAGTATTCAAGATAAATACCTTTTGGTTTCTCTCTTT TTCTCTTTGTGTAAATAACT
Product: transcriptional regulator Lrs14
Products: NA
Alternate protein names: Transcriptional Regulator Lrs; ArsR Family Transcriptional Regulator
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSIEITEKSVIFKRFLAVAYGLSEAEIEAFLKIMESKEGKNVDTISSELGISKSRASLILKKLSDAGLIEKEKSGNNKGG RPKFMYYVNKDEIRTKLEKKANELCDQLKQLISSLG
Sequences:
>Translated_116_residues MSIEITEKSVIFKRFLAVAYGLSEAEIEAFLKIMESKEGKNVDTISSELGISKSRASLILKKLSDAGLIEKEKSGNNKGG RPKFMYYVNKDEIRTKLEKKANELCDQLKQLISSLG >Mature_115_residues SIEITEKSVIFKRFLAVAYGLSEAEIEAFLKIMESKEGKNVDTISSELGISKSRASLILKKLSDAGLIEKEKSGNNKGGR PKFMYYVNKDEIRTKLEKKANELCDQLKQLISSLG
Specific function: Unknown
COG id: COG3355
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12961; Mature: 12830
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEITEKSVIFKRFLAVAYGLSEAEIEAFLKIMESKEGKNVDTISSELGISKSRASLIL CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHH KKLSDAGLIEKEKSGNNKGGRPKFMYYVNKDEIRTKLEKKANELCDQLKQLISSLG HHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIEITEKSVIFKRFLAVAYGLSEAEIEAFLKIMESKEGKNVDTISSELGISKSRASLIL CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHH KKLSDAGLIEKEKSGNNKGGRPKFMYYVNKDEIRTKLEKKANELCDQLKQLISSLG HHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA