Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15920257

Identifier: 15920257

GI number: 15920257

Start: 101106

End: 101513

Strand: Reverse

Name: 15920257

Synonym: ST0078

Alternate gene names: NA

Gene position: 101513-101106 (Counterclockwise)

Preceding gene: 15920264

Following gene: 15920252

Centisome position: 3.77

GC content: 34.31

Gene sequence:

>408_bases
ATGCCCAGTACCTATGATTGCTACATTTCTCATTTTCACACCTACATACTCTTATTAGCCAAATCTCTTAATATTTTTTT
GTCTATCTTATTTGTTGAGGTAAGAGGCATTGATTGTATGAAGATGAACTTATCTGGAATCCACCACTTTTGGATCTTCC
CTTGGTTACTCATTTCGAGCAAGAAGTTCCTTAATTCTTCTTCAGTAATTGGCTCTTTAGGAACTATAAATGCTATAGGT
CTTTCACCCCATTTCTCGTCCTTTCTACCTACAACCGCTACTTGTGAGACCTTAGGATACAATGATATTACATTTTCTAA
AAGTAATGACGGAATAAATTCACCACCACTTTTTATTGCATCTTTCTCTCTATCTACAATATGTACATATCCATACTCAT
CAATATAA

Upstream 100 bases:

>100_bases
GAATATCCTTTTGATCCAAATTAGCTTCTTCTAACGCTTGTTTTATAGCCTCCCATGCTAATTCTTGAAGATTTACGTCA
GTCCTAACGCCAAACTTAGT

Downstream 100 bases:

>100_bases
CCTAAATCTCCCGTGTGAAGCCATCCACCTCTCCATAAAGCTTTAGTCTTCTCCGGGTCTTTATAATACTCCTTTGTAAG
CCAAGGACTTCTTACAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPSTYDCYISHFHTYILLLAKSLNIFLSILFVEVRGIDCMKMNLSGIHHFWIFPWLLISSKKFLNSSSVIGSLGTINAIG
LSPHFSSFLPTTATCETLGYNDITFSKSNDGINSPPLFIASFSLSTICTYPYSSI

Sequences:

>Translated_135_residues
MPSTYDCYISHFHTYILLLAKSLNIFLSILFVEVRGIDCMKMNLSGIHHFWIFPWLLISSKKFLNSSSVIGSLGTINAIG
LSPHFSSFLPTTATCETLGYNDITFSKSNDGINSPPLFIASFSLSTICTYPYSSI
>Mature_134_residues
PSTYDCYISHFHTYILLLAKSLNIFLSILFVEVRGIDCMKMNLSGIHHFWIFPWLLISSKKFLNSSSVIGSLGTINAIGL
SPHFSSFLPTTATCETLGYNDITFSKSNDGINSPPLFIASFSLSTICTYPYSSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15004; Mature: 14872

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTYDCYISHFHTYILLLAKSLNIFLSILFVEVRGIDCMKMNLSGIHHFWIFPWLLISS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
KKFLNSSSVIGSLGTINAIGLSPHFSSFLPTTATCETLGYNDITFSKSNDGINSPPLFIA
HHHCCCCCHHCCCCCEEEEECCCCCHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCEEEE
SFSLSTICTYPYSSI
EECCCEEECCCCCCC
>Mature Secondary Structure 
PSTYDCYISHFHTYILLLAKSLNIFLSILFVEVRGIDCMKMNLSGIHHFWIFPWLLISS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
KKFLNSSSVIGSLGTINAIGLSPHFSSFLPTTATCETLGYNDITFSKSNDGINSPPLFIA
HHHCCCCCHHCCCCCEEEEECCCCCHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCEEEE
SFSLSTICTYPYSSI
EECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA