Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185437
Identifier: 159185437
GI number: 159185437
Start: 1969706
End: 1970059
Strand: Direct
Name: 159185437
Synonym: Atu8168
Alternate gene names: NA
Gene position: 1969706-1970059 (Clockwise)
Preceding gene: 15889294
Following gene: 15889298
Centisome position: 69.32
GC content: 56.78
Gene sequence:
>354_bases ATGCCGCAAACGATTACCCAGACCGTCACGGACTACGTCCATGCCATGGCCTATGCGGATGAGGGCCTGATGCGGGACGT ATTCGATCCTCGCGCCAGCATCGTCGGCACCTTCGAAGGTGAAATCGAATGGCTGTCGCTGGAAGATTTCGTCGACCAGA TGCGCAAGAGCGAACGCGGGCTGCCCGACCACGATCCCGCCTTCGAAATCATGGGCATCGACAAGGAGGGTGACAGTGCC TCGGTAAAGCTCACAACCCGCTTCGACGGCATGGATTTTTACGAATATCTGTCCCTGCTGGAACGCGACGGCAGCTGGTC GATCGTGCACAAGCTTTATCACATAAAGCCATAG
Upstream 100 bases:
>100_bases ACCTTTCAAAAGAGCATATAGGCGCATTTTCAGGGCCTTATGGTGGAAAGTCGCCAACGGGTGTAAGCTCGGCTTTTGGA TCCGAAGGGAGGACGATCCG
Downstream 100 bases:
>100_bases GATCATCAAAACAGAGATGAAAATGGGGAAGAGAAAAGGCTAAGCCTTTGAAAATACTGGTGCCCCCGACAAGGTTCGAA CTCGTGACCCCCTGATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPQTITQTVTDYVHAMAYADEGLMRDVFDPRASIVGTFEGEIEWLSLEDFVDQMRKSERGLPDHDPAFEIMGIDKEGDSA SVKLTTRFDGMDFYEYLSLLERDGSWSIVHKLYHIKP
Sequences:
>Translated_117_residues MPQTITQTVTDYVHAMAYADEGLMRDVFDPRASIVGTFEGEIEWLSLEDFVDQMRKSERGLPDHDPAFEIMGIDKEGDSA SVKLTTRFDGMDFYEYLSLLERDGSWSIVHKLYHIKP >Mature_116_residues PQTITQTVTDYVHAMAYADEGLMRDVFDPRASIVGTFEGEIEWLSLEDFVDQMRKSERGLPDHDPAFEIMGIDKEGDSAS VKLTTRFDGMDFYEYLSLLERDGSWSIVHKLYHIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13452; Mature: 13321
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTITQTVTDYVHAMAYADEGLMRDVFDPRASIVGTFEGEIEWLSLEDFVDQMRKSERG CCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHEEECCCCCEEEEEHHHHHHHHHHHHCC LPDHDPAFEIMGIDKEGDSASVKLTTRFDGMDFYEYLSLLERDGSWSIVHKLYHIKP CCCCCCCEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure PQTITQTVTDYVHAMAYADEGLMRDVFDPRASIVGTFEGEIEWLSLEDFVDQMRKSERG CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHEEECCCCCEEEEEHHHHHHHHHHHHCC LPDHDPAFEIMGIDKEGDSASVKLTTRFDGMDFYEYLSLLERDGSWSIVHKLYHIKP CCCCCCCEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA