Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185424

Identifier: 159185424

GI number: 159185424

Start: 410201

End: 410443

Strand: Reverse

Name: 159185424

Synonym: Atu8120

Alternate gene names: NA

Gene position: 410443-410201 (Counterclockwise)

Preceding gene: 159184300

Following gene: 15887754

Centisome position: 14.44

GC content: 58.85

Gene sequence:

>243_bases
ATGAAGAACGAGAGATGGACAGAACCTGTCGAGGTCAATCTTGAGGCGAAGGGCAAGAGTGTCGTCGCCGGCCCCTTTGA
AGCGCTGACATTGTTGACCGAAGGCTGGCCCAGGACTGGCGGATTGAGCTTCGTGAAAGCCAGAAGCGCCTGCCGCGCCG
CCCTTGACGGGCGCAAATCGCCGGAGGAAGCGCGCAAATGCTTCACCGATGCGGTTTCCGAGATGCAGAAAAATCCGCAC
TGA

Upstream 100 bases:

>100_bases
TGCTTGCGCATATCCTAAGCAACAGTGACACACGACTGCGTTCATGGGTTACTTCGCTGTCGGGTGTATTTCGGGATCGC
GTTGCTCTGGGAGGTGCACG

Downstream 100 bases:

>100_bases
CAAGCCCAACAGAAAACGGCTCCCAAAAGGGAGCCGTTCTTTTTGGCTGGCGCTTGCGATGATAGAATGGCCGGAAGCGC
CTTTTCAGACCCTTACATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKNERWTEPVEVNLEAKGKSVVAGPFEALTLLTEGWPRTGGLSFVKARSACRAALDGRKSPEEARKCFTDAVSEMQKNPH

Sequences:

>Translated_80_residues
MKNERWTEPVEVNLEAKGKSVVAGPFEALTLLTEGWPRTGGLSFVKARSACRAALDGRKSPEEARKCFTDAVSEMQKNPH
>Mature_80_residues
MKNERWTEPVEVNLEAKGKSVVAGPFEALTLLTEGWPRTGGLSFVKARSACRAALDGRKSPEEARKCFTDAVSEMQKNPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8817; Mature: 8817

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNERWTEPVEVNLEAKGKSVVAGPFEALTLLTEGWPRTGGLSFVKARSACRAALDGRKS
CCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
PEEARKCFTDAVSEMQKNPH
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNERWTEPVEVNLEAKGKSVVAGPFEALTLLTEGWPRTGGLSFVKARSACRAALDGRKS
CCCCCCCCCEEEEEECCCCEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
PEEARKCFTDAVSEMQKNPH
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA