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The map label for this gene is sun [H]

Identifier: 159185402

GI number: 159185402

Start: 2829891

End: 2831276

Strand: Reverse

Name: sun [H]

Synonym: Atu2825

Alternate gene names: 159185402

Gene position: 2831276-2829891 (Counterclockwise)

Preceding gene: 15890072

Following gene: 159185401

Centisome position: 99.64

GC content: 60.1

Gene sequence:

>1386_bases
TTGACATCCGATATTCAGAGTAAGCCGGCGCGGTCCAGAAAACCGAAGCCAGCGCATGCAAGGGGCCGTGAAGACGGCCC
TTCGTCTTTCGAGGACAAGCCGGGTCTTGCGGCGCGCATTGCTGCCACCCGCATTCTCGCGGCGGTTCTGGAAAAGAAGA
CCTCCATGGACGGGATGCTCGACAGCGAAAACGGCAATCCCGTCTATCGTGCGTTGTCGCTTGCTGATCGGGCACTGGTG
AGGGCGGTCGTCAATAGTGCGCTCCGGCACCTTCCCCGCATTGAGACGGCATTGTCGATGTTGTTGGATGGGCCATTGCC
GCAAGGAGCCCGATCGCTGCATCACGTCCTCGTCGTTGGGGCTGCGCAGATGCTTTATCTCGATGTGCCGGATCATTCCG
CTGTCGATCTTGCCGTGGAGCAGGCGCATCGCGATCCTCGCAATAGGCGTTTCGTCAAGCTGGTCAATGCCGTGCTTCGA
AGGCTCGGCCGTGAAAAAGCGGAGATCGAAAAGGCCATCGCGGATGTTCCGGTCTTGCCGGAATGGTTCTATGCGCGGCT
TGTTTCGGCTTATGGCGATGAGGTGGCTCAAAGGATCTCGCAAGCACAGCTGACACCGTCCTGCATTGACTTGACGGTAA
AGGCCGATCCCGCTCTTTGGGCGGAAAGACTGGGTGGCACGCTTATGCCGAATGGCAGCGTGCGTCTGGGTGAATTCGAA
GGCCAGATCCCCTCGCTCGACGGTTTCGCCGAGGGCGCATGGTGGGTTCAGGATCTCGCAGCCAGCATGCCGGTAAGGCT
GCTGGGCGATATCTCCGGCAAGCGCGTCGCCGATCTTTGCGCTGCCCCCGGCGGCAAGACCGCCCAGCTTGCGCTGGCGG
GCGCCAGGGTAACGGCGCTGGATCAGTCCGGCAACCGTCTTCGCCGCCTTCGGGAAAATCTCGACCGACTTGGTCTCCAT
GCCGAAACGGTGGAGGCCAATATGCTGAAATACCAGCCGGAACAGCTTTTCGACGCCGTGCTGCTCGATGCACCCTGTTC
GTCTACCGGCACTTTGCGCAAGCATCCCGACGTCTGCTGGACGAAAGACGAGAACGACATTGCCAAACTCGCGGCACTTC
AGGGCCAGATGCTGCGACATGCGCTAACGCTCGTCGGGCCGGGCGGCCTCGTGGTCTTTTCCAACTGCTCGCTCGATCCT
TCCGAAGGGGAAGAGATGATTGCCGAGGTTCTGGCGGAAAACCCTGATGTGGAGCGTGTTGCCGTTCACAGGGAAGACTG
GCCCGGAATGGAAGCGGCGATTAGTGCCGCGGGCGATCTTCGCACGACACCTGATATGTTCGGTGGCGTCGATGGGTTTT
TTAGCAGTGTCTTGCGTAAGAAGTAG

Upstream 100 bases:

>100_bases
CGCCGCCGCCATCGGGTGATAGACCGGTGCGCAAATCAGGCTCCGTTCCCACAACGGGCTGGAGACGAGGCAATGAAAAC
GAGCGCAAGGGGCCGTGGTC

Downstream 100 bases:

>100_bases
AAAAAAGCCAAGCTCTCGCGAATCATTAGATATTTATCGAAAACGTTCCGATCATCGCGGTTCACTGATAAAAACAAAAC
ATGTGAAACGGGAAACACAG

Product: Sun protein

Products: NA

Alternate protein names: 16S rRNA m5C967 methyltransferase; rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTSDIQSKPARSRKPKPAHARGREDGPSSFEDKPGLAARIAATRILAAVLEKKTSMDGMLDSENGNPVYRALSLADRALV
RAVVNSALRHLPRIETALSMLLDGPLPQGARSLHHVLVVGAAQMLYLDVPDHSAVDLAVEQAHRDPRNRRFVKLVNAVLR
RLGREKAEIEKAIADVPVLPEWFYARLVSAYGDEVAQRISQAQLTPSCIDLTVKADPALWAERLGGTLMPNGSVRLGEFE
GQIPSLDGFAEGAWWVQDLAASMPVRLLGDISGKRVADLCAAPGGKTAQLALAGARVTALDQSGNRLRRLRENLDRLGLH
AETVEANMLKYQPEQLFDAVLLDAPCSSTGTLRKHPDVCWTKDENDIAKLAALQGQMLRHALTLVGPGGLVVFSNCSLDP
SEGEEMIAEVLAENPDVERVAVHREDWPGMEAAISAAGDLRTTPDMFGGVDGFFSSVLRKK

Sequences:

>Translated_461_residues
MTSDIQSKPARSRKPKPAHARGREDGPSSFEDKPGLAARIAATRILAAVLEKKTSMDGMLDSENGNPVYRALSLADRALV
RAVVNSALRHLPRIETALSMLLDGPLPQGARSLHHVLVVGAAQMLYLDVPDHSAVDLAVEQAHRDPRNRRFVKLVNAVLR
RLGREKAEIEKAIADVPVLPEWFYARLVSAYGDEVAQRISQAQLTPSCIDLTVKADPALWAERLGGTLMPNGSVRLGEFE
GQIPSLDGFAEGAWWVQDLAASMPVRLLGDISGKRVADLCAAPGGKTAQLALAGARVTALDQSGNRLRRLRENLDRLGLH
AETVEANMLKYQPEQLFDAVLLDAPCSSTGTLRKHPDVCWTKDENDIAKLAALQGQMLRHALTLVGPGGLVVFSNCSLDP
SEGEEMIAEVLAENPDVERVAVHREDWPGMEAAISAAGDLRTTPDMFGGVDGFFSSVLRKK
>Mature_460_residues
TSDIQSKPARSRKPKPAHARGREDGPSSFEDKPGLAARIAATRILAAVLEKKTSMDGMLDSENGNPVYRALSLADRALVR
AVVNSALRHLPRIETALSMLLDGPLPQGARSLHHVLVVGAAQMLYLDVPDHSAVDLAVEQAHRDPRNRRFVKLVNAVLRR
LGREKAEIEKAIADVPVLPEWFYARLVSAYGDEVAQRISQAQLTPSCIDLTVKADPALWAERLGGTLMPNGSVRLGEFEG
QIPSLDGFAEGAWWVQDLAASMPVRLLGDISGKRVADLCAAPGGKTAQLALAGARVTALDQSGNRLRRLRENLDRLGLHA
ETVEANMLKYQPEQLFDAVLLDAPCSSTGTLRKHPDVCWTKDENDIAKLAALQGQMLRHALTLVGPGGLVVFSNCSLDPS
EGEEMIAEVLAENPDVERVAVHREDWPGMEAAISAAGDLRTTPDMFGGVDGFFSSVLRKK

Specific function: Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA [H]

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=174, Percent_Identity=35.0574712643678, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI76150623, Length=174, Percent_Identity=35.0574712643678, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI32698918, Length=194, Percent_Identity=30.4123711340206, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI23199998, Length=224, Percent_Identity=30.8035714285714, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI8922322, Length=224, Percent_Identity=30.8035714285714, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI270288816, Length=224, Percent_Identity=30.8035714285714, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI270288818, Length=224, Percent_Identity=30.8035714285714, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI11545785, Length=178, Percent_Identity=32.5842696629214, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI40316918, Length=188, Percent_Identity=31.9148936170213, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI2367212, Length=441, Percent_Identity=31.5192743764172, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI87081985, Length=220, Percent_Identity=31.3636363636364, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17536757, Length=228, Percent_Identity=30.7017543859649, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71998419, Length=240, Percent_Identity=27.9166666666667, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115534021, Length=240, Percent_Identity=27.9166666666667, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324268, Length=257, Percent_Identity=31.5175097276265, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6319447, Length=203, Percent_Identity=33.4975369458128, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI22024126, Length=186, Percent_Identity=31.7204301075269, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24668781, Length=193, Percent_Identity=31.6062176165803, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI21356513, Length=193, Percent_Identity=31.6062176165803, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21355201, Length=180, Percent_Identity=31.6666666666667, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: =2.1.1.176 [H]

Molecular weight: Translated: 49919; Mature: 49787

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDIQSKPARSRKPKPAHARGREDGPSSFEDKPGLAARIAATRILAAVLEKKTSMDGML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DSENGNPVYRALSLADRALVRAVVNSALRHLPRIETALSMLLDGPLPQGARSLHHVLVVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AAQMLYLDVPDHSAVDLAVEQAHRDPRNRRFVKLVNAVLRRLGREKAEIEKAIADVPVLP
HEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCH
EWFYARLVSAYGDEVAQRISQAQLTPSCIDLTVKADPALWAERLGGTLMPNGSVRLGEFE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCEECCCCCEEECCCC
GQIPSLDGFAEGAWWVQDLAASMPVRLLGDISGKRVADLCAAPGGKTAQLALAGARVTAL
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCEEEEE
DQSGNRLRRLRENLDRLGLHAETVEANMLKYQPEQLFDAVLLDAPCSSTGTLRKHPDVCW
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TKDENDIAKLAALQGQMLRHALTLVGPGGLVVFSNCSLDPSEGEEMIAEVLAENPDVERV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHEE
AVHREDWPGMEAAISAAGDLRTTPDMFGGVDGFFSSVLRKK
EEECCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TSDIQSKPARSRKPKPAHARGREDGPSSFEDKPGLAARIAATRILAAVLEKKTSMDGML
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DSENGNPVYRALSLADRALVRAVVNSALRHLPRIETALSMLLDGPLPQGARSLHHVLVVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AAQMLYLDVPDHSAVDLAVEQAHRDPRNRRFVKLVNAVLRRLGREKAEIEKAIADVPVLP
HEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCH
EWFYARLVSAYGDEVAQRISQAQLTPSCIDLTVKADPALWAERLGGTLMPNGSVRLGEFE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCEECCCCCEEECCCC
GQIPSLDGFAEGAWWVQDLAASMPVRLLGDISGKRVADLCAAPGGKTAQLALAGARVTAL
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCEEEEE
DQSGNRLRRLRENLDRLGLHAETVEANMLKYQPEQLFDAVLLDAPCSSTGTLRKHPDVCW
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TKDENDIAKLAALQGQMLRHALTLVGPGGLVVFSNCSLDPSEGEEMIAEVLAENPDVERV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHEE
AVHREDWPGMEAAISAAGDLRTTPDMFGGVDGFFSSVLRKK
EEECCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA