Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cobO [H]
Identifier: 159185391
GI number: 159185391
Start: 2810321
End: 2810938
Strand: Direct
Name: cobO [H]
Synonym: Atu2807
Alternate gene names: 159185391
Gene position: 2810321-2810938 (Clockwise)
Preceding gene: 159185388
Following gene: 15890055
Centisome position: 98.9
GC content: 61.0
Gene sequence:
>618_bases ATGACCCGCGACATCAGCGACAGCGAAGCCGAACGCCACCGGCAGAAAATGGTCAACCGCAAGACTGTGCAGGACGCCGA AGTTGCGGAAAAGACCATCGAAAAAGGCCTGCTGATGATCAATACCGGGCCCGGCAAGGGCAAGTCCACGGCCGCGTTCG GCCTCGCCTTGCGCATGCTCGGCACCGGGCGGCGAGTTGGCGTCGTGCAATTCATCAAGGGTGCATGGTCGACGGGAGAG CAGCAGGCCCTGACGCTCTTCGGGGATAAGGTCGTCTGGCGCACCATGGGGGAGGGCTTCACTTGGGACACGCAGGACCT CAAACGCGATGTCGCGGCCGCGGCAAAGGCCTGGGAAGAGGCCAAGGCCCTGATGGCCGACCAAACAATCGGTCTTCTGC TCCTCGACGAGCTGAACATCGCTTTGCGCTATGATTACCTGCCGCTGGAAGAAGTTGTCGAAACGCTCTCTAGTCGCAGG CCCGATCTGCATGTCATCGTCACCGGCCGCAACGCCAAGCAGCCGCTGATCGACGCCGCCGATATGGTGACGGAAATGAC GCTGGTGAAACATCACTTCAAGGCGGGCGTGAAGGCCCAAGCCGGGATAGAATTCTGA
Upstream 100 bases:
>100_bases CGTGACCAGCGCATTGCCGGGTGCGGCAAATTGAGTATAGTCGCCGCTCCGAATGGCGGGGGCAAAAGGTCTCGCGCCGC AGGACAAGAAGGAACGAGCG
Downstream 100 bases:
>100_bases CATGACAGCACGGGTGCTGATGTTTCAGGGAACCGGCTCCGATGTCGGCAAATCGCTGATGGTGGCCGGTCTTGCCCGGG CATTCACCCGGCGCGGCCTC
Product: cob(I)alamin adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; Corrinoid adenosyltransferase [H]
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTRDISDSEAERHRQKMVNRKTVQDAEVAEKTIEKGLLMINTGPGKGKSTAAFGLALRMLGTGRRVGVVQFIKGAWSTGE QQALTLFGDKVVWRTMGEGFTWDTQDLKRDVAAAAKAWEEAKALMADQTIGLLLLDELNIALRYDYLPLEEVVETLSSRR PDLHVIVTGRNAKQPLIDAADMVTEMTLVKHHFKAGVKAQAGIEF
Sequences:
>Translated_205_residues MTRDISDSEAERHRQKMVNRKTVQDAEVAEKTIEKGLLMINTGPGKGKSTAAFGLALRMLGTGRRVGVVQFIKGAWSTGE QQALTLFGDKVVWRTMGEGFTWDTQDLKRDVAAAAKAWEEAKALMADQTIGLLLLDELNIALRYDYLPLEEVVETLSSRR PDLHVIVTGRNAKQPLIDAADMVTEMTLVKHHFKAGVKAQAGIEF >Mature_204_residues TRDISDSEAERHRQKMVNRKTVQDAEVAEKTIEKGLLMINTGPGKGKSTAAFGLALRMLGTGRRVGVVQFIKGAWSTGEQ QALTLFGDKVVWRTMGEGFTWDTQDLKRDVAAAAKAWEEAKALMADQTIGLLLLDELNIALRYDYLPLEEVVETLSSRRP DLHVIVTGRNAKQPLIDAADMVTEMTLVKHHFKAGVKAQAGIEF
Specific function: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids [H]
COG id: COG2109
COG function: function code H; ATP:corrinoid adenosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787525, Length=195, Percent_Identity=48.2051282051282, Blast_Score=188, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003724 [H]
Pfam domain/function: PF02572 CobA_CobO_BtuR [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 22680; Mature: 22549
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDISDSEAERHRQKMVNRKTVQDAEVAEKTIEKGLLMINTGPGKGKSTAAFGLALRML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHH GTGRRVGVVQFIKGAWSTGEQQALTLFGDKVVWRTMGEGFTWDTQDLKRDVAAAAKAWEE CCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH AKALMADQTIGLLLLDELNIALRYDYLPLEEVVETLSSRRPDLHVIVTGRNAKQPLIDAA HHHHHHHCHHHEEEEECCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH DMVTEMTLVKHHFKAGVKAQAGIEF HHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TRDISDSEAERHRQKMVNRKTVQDAEVAEKTIEKGLLMINTGPGKGKSTAAFGLALRML CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHH GTGRRVGVVQFIKGAWSTGEQQALTLFGDKVVWRTMGEGFTWDTQDLKRDVAAAAKAWEE CCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH AKALMADQTIGLLLLDELNIALRYDYLPLEEVVETLSSRRPDLHVIVTGRNAKQPLIDAA HHHHHHHCHHHEEEEECCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH DMVTEMTLVKHHFKAGVKAQAGIEF HHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]