Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cobG [H]
Identifier: 159185389
GI number: 159185389
Start: 2803621
End: 2804976
Strand: Reverse
Name: cobG [H]
Synonym: Atu2803
Alternate gene names: 159185389
Gene position: 2804976-2803621 (Counterclockwise)
Preceding gene: 15890051
Following gene: 15890049
Centisome position: 98.71
GC content: 62.09
Gene sequence:
>1356_bases ATGGCTGCTGTTGCCGATCCCGTTCAGCCATTTGGCCGCCGTGGTCTGTGCCCGGCCTTGTCCGCCCCCATGCAAACCGG CGACGGTTTTTTGTCGCGGGTTGCTTTCGAGGCGGATATTTCGCCCCATGTGATGGTGACGCTTTGCGGCCTCGCCGAGC GCCACGGCAATGGGTTGATCGACATTACGGCGCGCGGCAGCCTGCAATTTCGCGGCCTGACGCCGGAAAGCGCCTGCGCC CTCGCAAAAGATGTTCTGGCGCTTGATCTGCCACTACGCGAAGGGCTTGCGGTCGAGACTTCGCCGCTTGCCGGCCGGGA TGATGCGGAAATCGCGGATGGCCGTTTTCTCGCCGAGGAGATTAGAAAAGGCGCTGGCGCCCTGGCGCTGCATGACAAAC TCGCGGCCAAAACTTCTGTTGTCATCGATGGCGGCGGACGCCTCGCAATGGGCGATTTGCTGGCCGATATTCGTCTGAAA GCAATCCGGCTGGAAGGTCGGACTTTCTGGCAACTGCTTGTTGGCGGGCCGGAAAGCAAGGCGTTGAAGGCGGGGCTGGT TGAGCCGGTTGCGGCGGCCGGTGTGGTTCTGTCACTTCTTGTTTTTCTGGCTGAAAAGGGACCGTTTGCCCGCGGCCGCG ATGTGGATCAGCAAACGGTGACGGCGATTTGCGGTGAGCGTCTGCTGGGTTGGGGAAGCGGGGGCGAAGCCCGGACCCCT TCGTTGCCCCTGGGTTTGATGATGACGGGAGAGAGCCGCTTCGCCGTTGGTGTCGCGCCTGCTTTCGGGCAGATTCGAAG TGCCGACTTGGCGCATCTCTGCGAGCGGGCTGACACGTTCGGTATCGATGCCCTGCGGCCATCGCTAAACCATAGCCTGC TATTTTTTGGATCGTCGTCGGCCTGTGAGGCTTTGCGTGAGGCTGCGGTGGCATCCGGCTTCGTCACGACGGCAGGCGAT GCGCGGTCCTCCATCGCGGTCTGTTCCGGCGCGCCGGGCTGTGCCTCGGCTTTTCTTCACACGCACGACCTGGCGGCTTT TGCTGCCGAAGAATGTGCCGCGTTGCTGGACGGTTCCTTCACGCTGCATGTTTCCGGCTGCGGCAAGGGCTGTGCACATC CCGCCCCTTCGCTCTTCACTCTCGCGGGTACTTCGGATGGCCTGGCATTCTCGATTTCCGGCCGCGCCGGTGACCCGCCA GCCGGGATTTTGCCTTTCGAGCAACAGCAGACCGCGCTTTCGCGGCTTGCCCGTCTTTACGAAAAAGAACATAAGCCCGG TGAAAACGCCGCCATCTTTTTTGCCCGTCTGGGCCGGGAGGAAATCGGTGCGGCGCTTCGACAGGATAACCAATGA
Upstream 100 bases:
>100_bases TATCCGCCCGCCGCCGTGGCTTGTGGCACAGCCGCCGCAATGCGGTGGATGCGGAGCTGGAAATGCTGATCCTGCCCCGA TCCGAAAGGGTAGGTGCATG
Downstream 100 bases:
>100_bases CCGACTATGATTATATTCGCGATGGCAATGCGATCTATGAGCGCTCTTTCGCCATTATTCGCGAGGAAGCGGATTTATCC GCCTTTACCGAAGAGCAGGC
Product: cobalamin biosynthesis associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MAAVADPVQPFGRRGLCPALSAPMQTGDGFLSRVAFEADISPHVMVTLCGLAERHGNGLIDITARGSLQFRGLTPESACA LAKDVLALDLPLREGLAVETSPLAGRDDAEIADGRFLAEEIRKGAGALALHDKLAAKTSVVIDGGGRLAMGDLLADIRLK AIRLEGRTFWQLLVGGPESKALKAGLVEPVAAAGVVLSLLVFLAEKGPFARGRDVDQQTVTAICGERLLGWGSGGEARTP SLPLGLMMTGESRFAVGVAPAFGQIRSADLAHLCERADTFGIDALRPSLNHSLLFFGSSSACEALREAAVASGFVTTAGD ARSSIAVCSGAPGCASAFLHTHDLAAFAAEECAALLDGSFTLHVSGCGKGCAHPAPSLFTLAGTSDGLAFSISGRAGDPP AGILPFEQQQTALSRLARLYEKEHKPGENAAIFFARLGREEIGAALRQDNQ
Sequences:
>Translated_451_residues MAAVADPVQPFGRRGLCPALSAPMQTGDGFLSRVAFEADISPHVMVTLCGLAERHGNGLIDITARGSLQFRGLTPESACA LAKDVLALDLPLREGLAVETSPLAGRDDAEIADGRFLAEEIRKGAGALALHDKLAAKTSVVIDGGGRLAMGDLLADIRLK AIRLEGRTFWQLLVGGPESKALKAGLVEPVAAAGVVLSLLVFLAEKGPFARGRDVDQQTVTAICGERLLGWGSGGEARTP SLPLGLMMTGESRFAVGVAPAFGQIRSADLAHLCERADTFGIDALRPSLNHSLLFFGSSSACEALREAAVASGFVTTAGD ARSSIAVCSGAPGCASAFLHTHDLAAFAAEECAALLDGSFTLHVSGCGKGCAHPAPSLFTLAGTSDGLAFSISGRAGDPP AGILPFEQQQTALSRLARLYEKEHKPGENAAIFFARLGREEIGAALRQDNQ >Mature_450_residues AAVADPVQPFGRRGLCPALSAPMQTGDGFLSRVAFEADISPHVMVTLCGLAERHGNGLIDITARGSLQFRGLTPESACAL AKDVLALDLPLREGLAVETSPLAGRDDAEIADGRFLAEEIRKGAGALALHDKLAAKTSVVIDGGGRLAMGDLLADIRLKA IRLEGRTFWQLLVGGPESKALKAGLVEPVAAAGVVLSLLVFLAEKGPFARGRDVDQQTVTAICGERLLGWGSGGEARTPS LPLGLMMTGESRFAVGVAPAFGQIRSADLAHLCERADTFGIDALRPSLNHSLLFFGSSSACEALREAAVASGFVTTAGDA RSSIAVCSGAPGCASAFLHTHDLAAFAAEECAALLDGSFTLHVSGCGKGCAHPAPSLFTLAGTSDGLAFSISGRAGDPPA GILPFEQQQTALSRLARLYEKEHKPGENAAIFFARLGREEIGAALRQDNQ
Specific function: Catalyzes the elimination of C-20 in precorrin-3A to form precorrin-3B [H]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012798 - InterPro: IPR005117 - InterPro: IPR006066 [H]
Pfam domain/function: PF03460 NIR_SIR_ferr [H]
EC number: =1.14.13.83 [H]
Molecular weight: Translated: 46702; Mature: 46571
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVADPVQPFGRRGLCPALSAPMQTGDGFLSRVAFEADISPHVMVTLCGLAERHGNGLI CCCCCCCHHHHCCCCCCHHHCCCCCCCCHHHHHEEEECCCCCCEEEHHHHHHHHCCCCEE DITARGSLQFRGLTPESACALAKDVLALDLPLREGLAVETSPLAGRDDAEIADGRFLAEE EEEECCCEEEECCCCHHHHHHHHHHHHEECCHHCCCEEECCCCCCCCCCCCCCCHHHHHH IRKGAGALALHDKLAAKTSVVIDGGGRLAMGDLLADIRLKAIRLEGRTFWQLLVGGPESK HHCCCCEEEEHHHHHCCEEEEEECCCCEEHHHHHHHHEEEEEEECCCEEEEEEECCCCHH ALKAGLVEPVAAAGVVLSLLVFLAEKGPFARGRDVDQQTVTAICGERLLGWGSGGEARTP HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SLPLGLMMTGESRFAVGVAPAFGQIRSADLAHLCERADTFGIDALRPSLNHSLLFFGSSS CCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCH ACEALREAAVASGFVTTAGDARSSIAVCSGAPGCASAFLHTHDLAAFAAEECAALLDGSF HHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE TLHVSGCGKGCAHPAPSLFTLAGTSDGLAFSISGRAGDPPAGILPFEQQQTALSRLARLY EEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH EKEHKPGENAAIFFARLGREEIGAALRQDNQ HHHCCCCCCCEEEEEHHCHHHHHHHHHCCCC >Mature Secondary Structure AAVADPVQPFGRRGLCPALSAPMQTGDGFLSRVAFEADISPHVMVTLCGLAERHGNGLI CCCCCCHHHHCCCCCCHHHCCCCCCCCHHHHHEEEECCCCCCEEEHHHHHHHHCCCCEE DITARGSLQFRGLTPESACALAKDVLALDLPLREGLAVETSPLAGRDDAEIADGRFLAEE EEEECCCEEEECCCCHHHHHHHHHHHHEECCHHCCCEEECCCCCCCCCCCCCCCHHHHHH IRKGAGALALHDKLAAKTSVVIDGGGRLAMGDLLADIRLKAIRLEGRTFWQLLVGGPESK HHCCCCEEEEHHHHHCCEEEEEECCCCEEHHHHHHHHEEEEEEECCCEEEEEEECCCCHH ALKAGLVEPVAAAGVVLSLLVFLAEKGPFARGRDVDQQTVTAICGERLLGWGSGGEARTP HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SLPLGLMMTGESRFAVGVAPAFGQIRSADLAHLCERADTFGIDALRPSLNHSLLFFGSSS CCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCH ACEALREAAVASGFVTTAGDARSSIAVCSGAPGCASAFLHTHDLAAFAAEECAALLDGSF HHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE TLHVSGCGKGCAHPAPSLFTLAGTSDGLAFSISGRAGDPPAGILPFEQQQTALSRLARLY EEEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH EKEHKPGENAAIFFARLGREEIGAALRQDNQ HHHCCCCCCCEEEEEHHCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2211521 [H]