Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185299

Identifier: 159185299

GI number: 159185299

Start: 2609462

End: 2609848

Strand: Reverse

Name: 159185299

Synonym: Atu2626

Alternate gene names: NA

Gene position: 2609848-2609462 (Counterclockwise)

Preceding gene: 159185300

Following gene: 159185298

Centisome position: 91.84

GC content: 60.21

Gene sequence:

>387_bases
ATGGAGTTTTATTTTCCGGCCGAATTCGGCGAGCAACTGGCCTTCGGCGCGGCGGTGGTATCAGCCATCATCGGCCTGTT
TTTCATGTTTGCACCGGGGTTGACGCTTCGCGCCTTCGGTCTGCAGCCGGCTGGCGAGCGCAGGGATGGTTATGCGCTCG
CGCGCTCGTCGCTTGCTGGCTTTTATCTCGGTCTCGGTGCTGCCGCGCTCCTTCTCGCCCAGCCCATGGTCTATCTCGCC
TTTGGTGCGGCATTCGGCCTCAGCGTCTTCGGCGGCATTCTCTCCATGCTGTCGGATGGTGGCGCAACCATGCGGAATTT
CTTACTTCTGGTTGTGCACTTTCTGCTGTCCGCACTCGCGTTGAGCTACGTCTTCGGGCTGGTCTGA

Upstream 100 bases:

>100_bases
ATCCGCAAAGTTTCCTTTGAACTTTGCCAGAGAGGGCGTTTTCCCGCTGTCGTGACCGTGTCATAACGCGAGCGAACAAC
ATAATGATTTGGGGAACGAG

Downstream 100 bases:

>100_bases
AGCGGGCTTTTTGGCATTTGTGCCGCAGATACGCCGCATCCTGAGCGAAATCGGAAAATTTAAACGCATTCCCCCTTGCC
CAAACGGCGCTTTCCGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MEFYFPAEFGEQLAFGAAVVSAIIGLFFMFAPGLTLRAFGLQPAGERRDGYALARSSLAGFYLGLGAAALLLAQPMVYLA
FGAAFGLSVFGGILSMLSDGGATMRNFLLLVVHFLLSALALSYVFGLV

Sequences:

>Translated_128_residues
MEFYFPAEFGEQLAFGAAVVSAIIGLFFMFAPGLTLRAFGLQPAGERRDGYALARSSLAGFYLGLGAAALLLAQPMVYLA
FGAAFGLSVFGGILSMLSDGGATMRNFLLLVVHFLLSALALSYVFGLV
>Mature_128_residues
MEFYFPAEFGEQLAFGAAVVSAIIGLFFMFAPGLTLRAFGLQPAGERRDGYALARSSLAGFYLGLGAAALLLAQPMVYLA
FGAAFGLSVFGGILSMLSDGGATMRNFLLLVVHFLLSALALSYVFGLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13459; Mature: 13459

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFYFPAEFGEQLAFGAAVVSAIIGLFFMFAPGLTLRAFGLQPAGERRDGYALARSSLAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHH
FYLGLGAAALLLAQPMVYLAFGAAFGLSVFGGILSMLSDGGATMRNFLLLVVHFLLSALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LSYVFGLV
HHHHHHCC
>Mature Secondary Structure
MEFYFPAEFGEQLAFGAAVVSAIIGLFFMFAPGLTLRAFGLQPAGERRDGYALARSSLAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHH
FYLGLGAAALLLAQPMVYLAFGAAFGLSVFGGILSMLSDGGATMRNFLLLVVHFLLSALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LSYVFGLV
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA