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The map label for this gene is atpD [H]

Identifier: 159185297

GI number: 159185297

Start: 2604717

End: 2606171

Strand: Reverse

Name: atpD [H]

Synonym: Atu2622

Alternate gene names: 159185297

Gene position: 2606171-2604717 (Counterclockwise)

Preceding gene: 15889878

Following gene: 15889876

Centisome position: 91.72

GC content: 60.41

Gene sequence:

>1455_bases
ATGGCTAAGGCAGCTACCCCCAAGAAAACCGCAGCGGTGAACGGCGCGGGCAAGGTTACCCAGGTTATCGGCGCTGTTGT
CGACGTGGCGTTCGAAGGCGAACTGCCTCCGATCCTGAACGCGCTCGAAACACAGAACAATGGCAACCGCCTCGTTCTGG
AAGTCGCGCAGCATCTCGGCGAAAACGTCGTGCGCACGATCGCCATGGACTCGACCGAAGGTCTGGTTCGCGGTCAGTCC
GTTGCTGACACGGGCGCACCGATCGAGGTTCCTGTTGGTCTGGAAACGCTCGGCCGCATCATGAACGTCATCGGCGAGCC
GGTTGACGAAGCCGGTCCGATCGTAACGGCCAAGAAGCGCGCCATCCACCAGGACGCACCGTCTTACGTCGAGCAGTCGA
CGGAAGGCCAGATCCTCGTCACCGGCATCAAGGTCGTCGACCTTCTCGCTCCTTACGCCAAGGGCGGCAAGATCGGCCTC
TTCGGCGGCGCCGGCGTGGGCAAGACGGTTCTCATCATGGAACTGATCAACAACGTCGCCAAGGCGCATGGTGGTTACTC
GGTATTCGCCGGCGTGGGTGAGCGTACCCGCGAAGGCAACGACCTTTATCACGAAATGATCGAGTCGAACGTCAACAAGC
TCGGTGGCGGCGAAGGCTCCAAGGCTGCGCTCGTGTACGGCCAGATGAACGAACCGCCGGGCGCCCGCGCTCGCGTCGCT
CTGACCGGTCTGACGATCGCTGAAAACTTCCGTGATGAAGGCCAGGACGTTCTGTTCTTCGTGGACAACATCTTCCGCTT
CACGCAGGCTGGTTCTGAAGTGTCGGCTCTGCTCGGCCGTATTCCTTCGGCCGTGGGTTACCAGCCGACGCTGGCAACCG
ACATGGGCCAGATGCAGGAACGCATCACCACCACGAACAAGGGTTCCATCACCTCGGTTCAGGCAATTTACGTTCCCGCC
GACGACTTGACCGACCCGGCGCCGGCAACCTCGTTCGCGCATCTTGACGCAACGACGGTTCTGTCGCGTTCGATCGCTGA
AAAGGGTATTTACCCGGCTGTTGACCCGCTCGACTCCACCTCGCGCATGCTCGACCCGATGATCGTCGGCGAGGAGCACT
ACGAAGTTGCCCGTAAGGTTCAGTCGACCCTGCAGCGCTACAAGTCTCTCCAGGACATCATCGCCATCCTCGGCATGGAC
GAACTGTCGGAAGAAGACAAGCTGACGGTTGCCCGCGCCCGCAAGATCGAGCGCTTCCTGTCGCAGCCGTTCTTCGTTGC
TGAAGTCTTCACCGGTTCTCCGGGTAAGCTCGTCGCGCTCGAAGACACGATCAAGGGCTTCAAGGGCCTGGTCAACGGCG
AATATGACAGCCTGCCGGAAGCAGCTTTCTACATGGTCGGTTCGATGGAAGAAGCCATCGAAAAGGCAAAGAAGCTGACT
GCTGAAGCCGCCTGA

Upstream 100 bases:

>100_bases
TTTCCTATAACCGTCAGCGTCAGGCTCAGATCACCAAGGAACTCATTGAAATCATTTCGGGCGCGGAAGCGCTCTGAGGT
AAGGAAAGAGGGTAAGGATA

Downstream 100 bases:

>100_bases
TTATAAATTGGTGGGCGCGTGGTTTTACCGCGCGCCTTCCGACCAATGACAGCGAAACCGAAATGGCTTTCGCCTGCGTT
GTTAAAAGACAAGTCCGTGA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MAKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLGENVVRTIAMDSTEGLVRGQS
VADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGL
FGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEGSKAALVYGQMNEPPGARARVA
LTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTNKGSITSVQAIYVPA
DDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQDIIAILGMD
ELSEEDKLTVARARKIERFLSQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDSLPEAAFYMVGSMEEAIEKAKKLT
AEAA

Sequences:

>Translated_484_residues
MAKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLGENVVRTIAMDSTEGLVRGQS
VADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGL
FGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEGSKAALVYGQMNEPPGARARVA
LTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTNKGSITSVQAIYVPA
DDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQDIIAILGMD
ELSEEDKLTVARARKIERFLSQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDSLPEAAFYMVGSMEEAIEKAKKLT
AEAA
>Mature_483_residues
AKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLGENVVRTIAMDSTEGLVRGQSV
ADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLF
GGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEGSKAALVYGQMNEPPGARARVAL
TGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTNKGSITSVQAIYVPAD
DLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQDIIAILGMDE
LSEEDKLTVARARKIERFLSQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDSLPEAAFYMVGSMEEAIEKAKKLTA
EAA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=478, Percent_Identity=79.9163179916318, Blast_Score=752, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=302, Percent_Identity=28.1456953642384, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI50345984, Length=297, Percent_Identity=25.9259259259259, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4757810, Length=297, Percent_Identity=25.9259259259259, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI19913426, Length=414, Percent_Identity=26.3285024154589, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI19913428, Length=377, Percent_Identity=25.9946949602122, Blast_Score=98, Evalue=2e-20,
Organism=Escherichia coli, GI1790170, Length=464, Percent_Identity=72.4137931034483, Blast_Score=678, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=387, Percent_Identity=29.4573643410853, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1790172, Length=421, Percent_Identity=24.4655581947743, Blast_Score=105, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI25144756, Length=475, Percent_Identity=76.8421052631579, Blast_Score=738, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=302, Percent_Identity=29.1390728476821, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17510931, Length=356, Percent_Identity=24.1573033707865, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71988063, Length=320, Percent_Identity=24.0625, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71988080, Length=320, Percent_Identity=24.0625, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17570191, Length=389, Percent_Identity=24.4215938303342, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71988074, Length=272, Percent_Identity=23.1617647058824, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=459, Percent_Identity=77.5599128540305, Blast_Score=714, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=376, Percent_Identity=26.5957446808511, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6319370, Length=407, Percent_Identity=25.3071253071253, Blast_Score=100, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6320016, Length=250, Percent_Identity=26, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24638766, Length=469, Percent_Identity=81.0234541577825, Blast_Score=755, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=476, Percent_Identity=71.6386554621849, Blast_Score=681, Evalue=0.0,
Organism=Drosophila melanogaster, GI24638768, Length=90, Percent_Identity=75.5555555555556, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI20129479, Length=320, Percent_Identity=27.8125, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583988, Length=304, Percent_Identity=29.2763157894737, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583986, Length=304, Percent_Identity=29.2763157894737, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583984, Length=304, Percent_Identity=29.2763157894737, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583992, Length=307, Percent_Identity=28.0130293159609, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281361666, Length=359, Percent_Identity=25.0696378830084, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24646341, Length=359, Percent_Identity=25.0696378830084, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17136796, Length=359, Percent_Identity=25.0696378830084, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24658560, Length=298, Percent_Identity=25.1677852348993, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 51433; Mature: 51302

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLG
CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEHHHHHHHHH
ENVVRTIAMDSTEGLVRGQSVADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKR
HHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHCCCEEHHHHH
AIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVA
HHHCCCHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
KAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEGSKAALVYGQMNEPPGARARVA
HHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEE
LTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQE
EECHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHH
RITTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDST
HHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
SRMLDPMIVGEEHYEVARKVQSTLQRYKSLQDIIAILGMDELSEEDKLTVARARKIERFL
HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH
SQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDSLPEAAFYMVGSMEEAIEKAKKLT
CCCEEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
AEAA
HCCC
>Mature Secondary Structure 
AKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLG
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEHHHHHHHHH
ENVVRTIAMDSTEGLVRGQSVADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKR
HHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHCCCEEHHHHH
AIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVA
HHHCCCHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
KAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEGSKAALVYGQMNEPPGARARVA
HHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEE
LTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQE
EECHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHH
RITTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDST
HHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
SRMLDPMIVGEEHYEVARKVQSTLQRYKSLQDIIAILGMDELSEEDKLTVARARKIERFL
HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH
SQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDSLPEAAFYMVGSMEEAIEKAKKLT
CCCEEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
AEAA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA