Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185281
Identifier: 159185281
GI number: 159185281
Start: 2567299
End: 2568507
Strand: Direct
Name: 159185281
Synonym: Atu2590
Alternate gene names: NA
Gene position: 2567299-2568507 (Clockwise)
Preceding gene: 15889846
Following gene: 159185282
Centisome position: 90.35
GC content: 59.64
Gene sequence:
>1209_bases ATGAGCCCTCGTTTGAACGACGCGCGCATTCTCATGTACAGCCATGATTCCTTCGGGCTCGGCCATCTGCGACGGTGTCG CACCATCGCGCATGCGCTGGTGGAGGATTATCGTGGCCTCAACGTCCTCATCATATCGGGCGCGACCATTGCCGGTGCAT TCGATTATCGCGCCCGCGTCGATTTCGTGAAAATCCCGAGCGTCATCAAGCTGCGCAACGGCGAATACACCTCGATGGAC AGGCATATCGATCTCCAGGAAACGCTGAAGATGCGCCGATCCATCATTTATCACACCGCCGAGAGCTTCCAGCCTGACAT CTTCATCGTCGACAAGGAGCCCATGGGCCTGCGCGGCGAGGTGGAGGAAACGCTTGCCTATCTCAAGGGACAGGGCACCA AGCTCGTCATTGGCCTGCGCGACGTCATGGATGCCCCGCAACTGCTCGAGGCCGAGTGGAAGCGCAACAACGTCATGACC AAGATCGGCCAGTTCTATGACCATGTCTGGGTCTACGGCCCGCCGGATTTCCACGACCCGCTGACAGGGCTCGACGTTCC GCAGACCGTGCGCGACAAGATGGATTTCGTCGGTTTCCTGCAACGATCCAAAACCCAGGCCGAAACCGTGGCACACCGGC CGGAAGGCGATTATCTTCTCATCACCACCGGCGGCGGCGGCGATGGCAGTGAACTGATAGATGACGTCATCAACGCCTAT CACCATGACCCGGAACTGACGCATAAAGCGCTTGTCGTGCTCGGCCCCTATATGCCCGCGGATCAGCGCCAGCGCTTCAT GAGCAGCGTTGCCGATATCCCGCATATCGAGATCATCGAATTCGACAACCGCATGGAAGACCTCGTCGCCGGGGCCCAGG CCGTTGTCTCGATGGGCGGCTACAACACCGTCTGCGAAATATTGTCCTTCGACAAACCCGCTCTCGTCGTGCCCCGCACG GTGCCGCGGGAAGAGCAGCTCATCCGCGCCACCCGCGCATCGGAGCTTGGCCTTTTCGACATGCTTTTGCCGGAAGACGC AGAGAACCCCGCAAAAATGGCAGAGGCTCTCAAAGCCCTGCCCAACCGCGCGCCTCCTTCCGTCAACTCCCAGAATCTGA AGCTCGACGGTCTGGAAAACATATCGCGTCGGATTGCGGAATGGCTGCCGCACGAGAGCGAGAAGGCACCGATTACGCTC ACCGCGTGA
Upstream 100 bases:
>100_bases ACGTGATGCTGCGGACCCCTTCAGATAAAATGGAATACACCTTGATCTATTGCCCTTCAGCCATCGCCTTTTTTGTGGAA GGCAAAAAGAGGTGTGGCCC
Downstream 100 bases:
>100_bases TCGGCTTCCCAACCAACACTGCTTCAAAAGAGACACGCGCAACGTGACCGATACAAAAAAAATCGTGGTTCTCCTCAAGG GCTATCCGCGCCTGTCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSPRLNDARILMYSHDSFGLGHLRRCRTIAHALVEDYRGLNVLIISGATIAGAFDYRARVDFVKIPSVIKLRNGEYTSMD RHIDLQETLKMRRSIIYHTAESFQPDIFIVDKEPMGLRGEVEETLAYLKGQGTKLVIGLRDVMDAPQLLEAEWKRNNVMT KIGQFYDHVWVYGPPDFHDPLTGLDVPQTVRDKMDFVGFLQRSKTQAETVAHRPEGDYLLITTGGGGDGSELIDDVINAY HHDPELTHKALVVLGPYMPADQRQRFMSSVADIPHIEIIEFDNRMEDLVAGAQAVVSMGGYNTVCEILSFDKPALVVPRT VPREEQLIRATRASELGLFDMLLPEDAENPAKMAEALKALPNRAPPSVNSQNLKLDGLENISRRIAEWLPHESEKAPITL TA
Sequences:
>Translated_402_residues MSPRLNDARILMYSHDSFGLGHLRRCRTIAHALVEDYRGLNVLIISGATIAGAFDYRARVDFVKIPSVIKLRNGEYTSMD RHIDLQETLKMRRSIIYHTAESFQPDIFIVDKEPMGLRGEVEETLAYLKGQGTKLVIGLRDVMDAPQLLEAEWKRNNVMT KIGQFYDHVWVYGPPDFHDPLTGLDVPQTVRDKMDFVGFLQRSKTQAETVAHRPEGDYLLITTGGGGDGSELIDDVINAY HHDPELTHKALVVLGPYMPADQRQRFMSSVADIPHIEIIEFDNRMEDLVAGAQAVVSMGGYNTVCEILSFDKPALVVPRT VPREEQLIRATRASELGLFDMLLPEDAENPAKMAEALKALPNRAPPSVNSQNLKLDGLENISRRIAEWLPHESEKAPITL TA >Mature_401_residues SPRLNDARILMYSHDSFGLGHLRRCRTIAHALVEDYRGLNVLIISGATIAGAFDYRARVDFVKIPSVIKLRNGEYTSMDR HIDLQETLKMRRSIIYHTAESFQPDIFIVDKEPMGLRGEVEETLAYLKGQGTKLVIGLRDVMDAPQLLEAEWKRNNVMTK IGQFYDHVWVYGPPDFHDPLTGLDVPQTVRDKMDFVGFLQRSKTQAETVAHRPEGDYLLITTGGGGDGSELIDDVINAYH HDPELTHKALVVLGPYMPADQRQRFMSSVADIPHIEIIEFDNRMEDLVAGAQAVVSMGGYNTVCEILSFDKPALVVPRTV PREEQLIRATRASELGLFDMLLPEDAENPAKMAEALKALPNRAPPSVNSQNLKLDGLENISRRIAEWLPHESEKAPITLT A
Specific function: Unknown
COG id: COG4671
COG function: function code R; Predicted glycosyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45095; Mature: 44964
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRLNDARILMYSHDSFGLGHLRRCRTIAHALVEDYRGLNVLIISGATIAGAFDYRARV CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECEECHHHEE DFVKIPSVIKLRNGEYTSMDRHIDLQETLKMRRSIIYHTAESFQPDIFIVDKEPMGLRGE EEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC VEETLAYLKGQGTKLVIGLRDVMDAPQLLEAEWKRNNVMTKIGQFYDHVWVYGPPDFHDP HHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC LTGLDVPQTVRDKMDFVGFLQRSKTQAETVAHRPEGDYLLITTGGGGDGSELIDDVINAY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH HHDPELTHKALVVLGPYMPADQRQRFMSSVADIPHIEIIEFDNRMEDLVAGAQAVVSMGG CCCCCHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC YNTVCEILSFDKPALVVPRTVPREEQLIRATRASELGLFDMLLPEDAENPAKMAEALKAL HHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHC PNRAPPSVNSQNLKLDGLENISRRIAEWLPHESEKAPITLTA CCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEC >Mature Secondary Structure SPRLNDARILMYSHDSFGLGHLRRCRTIAHALVEDYRGLNVLIISGATIAGAFDYRARV CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECEECHHHEE DFVKIPSVIKLRNGEYTSMDRHIDLQETLKMRRSIIYHTAESFQPDIFIVDKEPMGLRGE EEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC VEETLAYLKGQGTKLVIGLRDVMDAPQLLEAEWKRNNVMTKIGQFYDHVWVYGPPDFHDP HHHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC LTGLDVPQTVRDKMDFVGFLQRSKTQAETVAHRPEGDYLLITTGGGGDGSELIDDVINAY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH HHDPELTHKALVVLGPYMPADQRQRFMSSVADIPHIEIIEFDNRMEDLVAGAQAVVSMGG CCCCCHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC YNTVCEILSFDKPALVVPRTVPREEQLIRATRASELGLFDMLLPEDAENPAKMAEALKAL HHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHC PNRAPPSVNSQNLKLDGLENISRRIAEWLPHESEKAPITLTA CCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA