Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185262
Identifier: 159185262
GI number: 159185262
Start: 2516197
End: 2516583
Strand: Direct
Name: 159185262
Synonym: Atu2544
Alternate gene names: NA
Gene position: 2516197-2516583 (Clockwise)
Preceding gene: 159185261
Following gene: 15889807
Centisome position: 88.55
GC content: 55.3
Gene sequence:
>387_bases ATGCCTCGGACAAGCGATCCTTCCTACCTCCAACCCCTCCACCAATTCCGGCCGACTAAGCCATCACACGGTTTCTCAGG GATTGGTCTCGGACGTTTCGGGCCTAAACCCAAAACACCTGGACGCTTCCAGACATATCTTCTCTTCACAATGTATTCAG AACAGGCATCAATTCTTGCGAATGATGCAAACGTTTTTTCTTCAAAAGGATATTCCAGCACTCACGCGCCAAAGGCGCTC CGTGAGGGCGCCAAACTCTTGGCGACGCGCTATCGCGCTGTATTGCTTGCCGATCAGATCACCCATGCAGGCTCAGCGAG CCGTCGGCCATCATTGGCCGGCCCGTGCGAAGCGCAGCGGCAAAGCCGCGACAGCGTCAGCACATAA
Upstream 100 bases:
>100_bases TCATTAAGACCAGCTTCTCGAGATATCATCCGGTGATGCGCGGTCAGGCAACATCAATCCAGCATTCCCATCAGAGGAGC TTAAAGCTCCAACAACAAAA
Downstream 100 bases:
>100_bases CCACACCAATCGCGTTCCGCGATTGGTGGAGCTGAGCGGGATCGAACCGCTGACCCCCTGCTTGCAAAGCAGGTGCTCTC CCAGCTGAGCTACAGCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MPRTSDPSYLQPLHQFRPTKPSHGFSGIGLGRFGPKPKTPGRFQTYLLFTMYSEQASILANDANVFSSKGYSSTHAPKAL REGAKLLATRYRAVLLADQITHAGSASRRPSLAGPCEAQRQSRDSVST
Sequences:
>Translated_128_residues MPRTSDPSYLQPLHQFRPTKPSHGFSGIGLGRFGPKPKTPGRFQTYLLFTMYSEQASILANDANVFSSKGYSSTHAPKAL REGAKLLATRYRAVLLADQITHAGSASRRPSLAGPCEAQRQSRDSVST >Mature_127_residues PRTSDPSYLQPLHQFRPTKPSHGFSGIGLGRFGPKPKTPGRFQTYLLFTMYSEQASILANDANVFSSKGYSSTHAPKALR EGAKLLATRYRAVLLADQITHAGSASRRPSLAGPCEAQRQSRDSVST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13952; Mature: 13821
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTSDPSYLQPLHQFRPTKPSHGFSGIGLGRFGPKPKTPGRFQTYLLFTMYSEQASILA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCHHHHH NDANVFSSKGYSSTHAPKALREGAKLLATRYRAVLLADQITHAGSASRRPSLAGPCEAQR CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QSRDSVST HCCCCCCC >Mature Secondary Structure PRTSDPSYLQPLHQFRPTKPSHGFSGIGLGRFGPKPKTPGRFQTYLLFTMYSEQASILA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCHHHHH NDANVFSSKGYSSTHAPKALREGAKLLATRYRAVLLADQITHAGSASRRPSLAGPCEAQR CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QSRDSVST HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA