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The map label for this gene is ropB [H]

Identifier: 159185257

GI number: 159185257

Start: 2506293

End: 2506922

Strand: Reverse

Name: ropB [H]

Synonym: Atu2534

Alternate gene names: 159185257

Gene position: 2506922-2506293 (Counterclockwise)

Preceding gene: 15889800

Following gene: 15889796

Centisome position: 88.22

GC content: 59.52

Gene sequence:

>630_bases
ATGTCGATCATCAAGAAATCGCTTGCCGCCGTGACTATCGCCGTTGCGATTGCGAGCAACGCCTATTCCGCCGATCTCAC
CAACTACAATACGCAGCAATCTTTCGACTACGGCAATCAGCCGGCTTTCTCATGGAGCGGAGCCTATGTCGGTGCGCATG
GTGGCGTCGCCTCTCCGAAATTCAGTCCACTGGCCAGCGGCCGTGGCCTGACGGGTGGCGTTCAGGCGGGCTATAACTTC
CAGTTCGGCTCCGGCGTCGTCGGTGCGGAAGTGGAAGGCTCCTATCTCGGAAACGATGCGCGTGTGCCGAACGGCCGGTT
GCGTGAGCGTTTCCGGGGTGCGGCCAAGTTAAAGGCCGGCGTGGCGCTTGATCACACGCTTCTTTACGGCACTGCCGGCC
TGACCACGACGAAGTTTAAGGATGGCAATGGCGTGACGGGTCCCGACGGCTGGAAACAGGGGTATCTGGTCGGCGCCGGC
GTCGAACAGAGCTTTGGCGGCGGCCTGTCGGCTAAGTTTGAATATAACTATGTGAGCACGGGAAATGTGGCCACCACGAC
ATCCAGCGGCCGGTCGAAGACCGATGTCAGCGATCATGTCATCAAGGCCGGTCTGAACTATCGCTTCTGA

Upstream 100 bases:

>100_bases
GGCGCAGGAGACGAACGGGAACCGGCTTCCGGTTCTTCAACGCGAACTGAAACCTTGCGGGCGCCAGGCCTTGGCGCAGC
GGTTTCGTCTGGAGTCATTC

Downstream 100 bases:

>100_bases
TCGGCCGCTTCCATGAAGGCTTCCAGGGAGAATTCAAAAAATACCGCCGCTTTCAGCGTGGAAGCGGCGGTAGAACGGCG
CGTAGCGCGAAACAGGCGGG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSIIKKSLAAVTIAVAIASNAYSADLTNYNTQQSFDYGNQPAFSWSGAYVGAHGGVASPKFSPLASGRGLTGGVQAGYNF
QFGSGVVGAEVEGSYLGNDARVPNGRLRERFRGAAKLKAGVALDHTLLYGTAGLTTTKFKDGNGVTGPDGWKQGYLVGAG
VEQSFGGGLSAKFEYNYVSTGNVATTTSSGRSKTDVSDHVIKAGLNYRF

Sequences:

>Translated_209_residues
MSIIKKSLAAVTIAVAIASNAYSADLTNYNTQQSFDYGNQPAFSWSGAYVGAHGGVASPKFSPLASGRGLTGGVQAGYNF
QFGSGVVGAEVEGSYLGNDARVPNGRLRERFRGAAKLKAGVALDHTLLYGTAGLTTTKFKDGNGVTGPDGWKQGYLVGAG
VEQSFGGGLSAKFEYNYVSTGNVATTTSSGRSKTDVSDHVIKAGLNYRF
>Mature_208_residues
SIIKKSLAAVTIAVAIASNAYSADLTNYNTQQSFDYGNQPAFSWSGAYVGAHGGVASPKFSPLASGRGLTGGVQAGYNFQ
FGSGVVGAEVEGSYLGNDARVPNGRLRERFRGAAKLKAGVALDHTLLYGTAGLTTTKFKDGNGVTGPDGWKQGYLVGAGV
EQSFGGGLSAKFEYNYVSTGNVATTTSSGRSKTDVSDHVIKAGLNYRF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 21658; Mature: 21527

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIKKSLAAVTIAVAIASNAYSADLTNYNTQQSFDYGNQPAFSWSGAYVGAHGGVASPK
CCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCC
FSPLASGRGLTGGVQAGYNFQFGSGVVGAEVEGSYLGNDARVPNGRLRERFRGAAKLKAG
CCCCCCCCCCCCCCCCCCEEECCCCEEECEECCCCCCCCCCCCCHHHHHHHCCHHHHHCC
VALDHTLLYGTAGLTTTKFKDGNGVTGPDGWKQGYLVGAGVEQSFGGGLSAKFEYNYVST
EEECCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEEC
GNVATTTSSGRSKTDVSDHVIKAGLNYRF
CCEEEECCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIIKKSLAAVTIAVAIASNAYSADLTNYNTQQSFDYGNQPAFSWSGAYVGAHGGVASPK
CHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCC
FSPLASGRGLTGGVQAGYNFQFGSGVVGAEVEGSYLGNDARVPNGRLRERFRGAAKLKAG
CCCCCCCCCCCCCCCCCCEEECCCCEEECEECCCCCCCCCCCCCHHHHHHHCCHHHHHCC
VALDHTLLYGTAGLTTTKFKDGNGVTGPDGWKQGYLVGAGVEQSFGGGLSAKFEYNYVST
EEECCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEEC
GNVATTTSSGRSKTDVSDHVIKAGLNYRF
CCEEEECCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8589412 [H]