Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185226
Identifier: 159185226
GI number: 159185226
Start: 2431522
End: 2432046
Strand: Direct
Name: 159185226
Synonym: Atu2462
Alternate gene names: NA
Gene position: 2431522-2432046 (Clockwise)
Preceding gene: 15889732
Following gene: 15889734
Centisome position: 85.57
GC content: 64.19
Gene sequence:
>525_bases ATGAGCATTGCAGCCCAGAAGAACGACGACGACAGGCAGGCCCGTGCGCTCGCCGCCCTTGCCGAAAAACCCGATGGTAT CGTCGAGGCCATCGCCGCGAAGGCCGAGGTGGCGCCGGCCGAAATTCTGGCGATCCTGCCGCAAGGTGCCGCCGTTTCCG CGCCGGCCGACCGGTTCGACGCCATCTGGAACGAGATGCGCGGCTGGGGCGAAATCCTGATGATCGTGCAGACCGGCGAT ATCGTGCTGGAAGTGCCGGGCCACCTGCCGGAAGGCACTGAAAGCCACGGCTGGTTCAACATTCACGGCGACAGCCCCAT TGGCGGTCACATCAAGAAGGACAATTGCGCTGCGATCACCTTCGTCGATCGCGGCTTCCACGGCCGCCGCTCCTGCTCCG TCTGGTTCATGAATGCCGCCGGCGGCGCCATGTTCAAGATCTTCGTCCGCCGCGACGAGAACAAGGAACTGCTGGCCGGG CAACTGGCGAAGTTCGAAGAACTGCGGGACGGTTTCCGCGGCTGA
Upstream 100 bases:
>100_bases GTGGAGTATCTCTCCGGCCCGCATTTCGAAGGTTTCGACGTCATCATCCATGAAGACAAGAATGGCGAACGCCATTCGAT TGCCGCCTGAGGCCTACCCG
Downstream 100 bases:
>100_bases GAGCTGAGGAGAGGCTGCCCGGCCTCTCCTGCCCTCATTCCTGTGCTTGTCACAGGAATGAGAGCGGTGGGATGCGCTGG CATCGGCTTTCATGATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: HuvX Protein; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIWNEMRGWGEILMIVQTGD IVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVWFMNAAGGAMFKIFVRRDENKELLAG QLAKFEELRDGFRG
Sequences:
>Translated_174_residues MSIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIWNEMRGWGEILMIVQTGD IVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVWFMNAAGGAMFKIFVRRDENKELLAG QLAKFEELRDGFRG >Mature_173_residues SIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIWNEMRGWGEILMIVQTGDI VLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVWFMNAAGGAMFKIFVRRDENKELLAGQ LAKFEELRDGFRG
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18866; Mature: 18734
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFD CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHEEEECCCCCCCCCCHHHHH AIWNEMRGWGEILMIVQTGDIVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAIT HHHHHHCCCEEEEEEEECCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEE FVDRGFHGRRSCSVWFMNAAGGAMFKIFVRRDENKELLAGQLAKFEELRDGFRG EEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFD CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHEEEECCCCCCCCCCHHHHH AIWNEMRGWGEILMIVQTGDIVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAIT HHHHHHCCCEEEEEEEECCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEE FVDRGFHGRRSCSVWFMNAAGGAMFKIFVRRDENKELLAGQLAKFEELRDGFRG EEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA