Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185216
Identifier: 159185216
GI number: 159185216
Start: 2409211
End: 2409801
Strand: Direct
Name: 159185216
Synonym: Atu2439
Alternate gene names: NA
Gene position: 2409211-2409801 (Clockwise)
Preceding gene: 15889705
Following gene: 15889711
Centisome position: 84.78
GC content: 61.59
Gene sequence:
>591_bases ATGCGCCTTACGAAAACCCGCACCATTGCACGCCTCGGACTGGGAAAGATTGTCGCGCTCCTTGCGAGCCTGTTGATGTG GGTCACCCCGGCCTTTGCCCAGACCAGCGATCAATATTCTATCCAGGAAGTCGTGGATGCAGGCCACGGATTCTTCGGTG AAACCACCGGCGGCCTCGCCAAGGTGGTGGAGCGCGCCTTCCAGCAATATGGTCTTCCGAACGGTTATATTCTCGGCCAG GAAGGTTCCGGCGCCTTCGTTGCCGGCCTCACCTATGGTGAAGGCACGCTTTACACCAAGAATGCCGGCCAGCACCCCGT CTTCTGGCAGGGCCCGTCGCTCGGCCTCGATTATGGCGGTCAGGGCACCCGCGCCATGATGCTGGTGTACAACCTGCCCT CGGTCGACGCGCTTTATCGCCGTTACGGCGGCGTCAGCGGCTCCGCCTTCATCGTCGCCGGCGTCGGCATGACCTATCTG AAAAGCAGCGATGTGACGCTCGCCCCCATCCGCACCGGCATCGGCGCGCGCCTCGGCATCAATGTCGGTTATCTGAAACT TACCCAGCAGCCAACCTGGAACCCCTTCTGA
Upstream 100 bases:
>100_bases GAAACATGCTGTAGAACTTTGACTCTACGCATCGGCCCCGCGAAAATCGATTCGGTTTTTCGGGCTGATGCGTTAACGAA ACAGACGGACGGACATGACG
Downstream 100 bases:
>100_bases TAAGACAAGACGGTCGCGGCTTGTTCTTCTCTCCATGGGGGCGAAGGTAGCCCGAAGGGTCGGATGAGGGGGGCAAGGTT GCCGAATATCTCTACCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLAKVVERAFQQYGLPNGYILGQ EGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGGQGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYL KSSDVTLAPIRTGIGARLGINVGYLKLTQQPTWNPF
Sequences:
>Translated_196_residues MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLAKVVERAFQQYGLPNGYILGQ EGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGGQGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYL KSSDVTLAPIRTGIGARLGINVGYLKLTQQPTWNPF >Mature_196_residues MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLAKVVERAFQQYGLPNGYILGQ EGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGGQGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYL KSSDVTLAPIRTGIGARLGINVGYLKLTQQPTWNPF
Specific function: Unknown
COG id: COG5400
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20922; Mature: 20922
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHH KVVERAFQQYGLPNGYILGQEGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGG HHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCEEEECCCCCCCEEECCCCCCCCCCC QGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYLKSSDVTLAPIRTGIGARLGI CCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCEEEEHHCCCCCEECC NVGYLKLTQQPTWNPF EEEEEEEECCCCCCCC >Mature Secondary Structure MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHH KVVERAFQQYGLPNGYILGQEGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGG HHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCEEEECCCCCCCEEECCCCCCCCCCC QGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYLKSSDVTLAPIRTGIGARLGI CCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCEEEEHHCCCCCEECC NVGYLKLTQQPTWNPF EEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA