Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185216

Identifier: 159185216

GI number: 159185216

Start: 2409211

End: 2409801

Strand: Direct

Name: 159185216

Synonym: Atu2439

Alternate gene names: NA

Gene position: 2409211-2409801 (Clockwise)

Preceding gene: 15889705

Following gene: 15889711

Centisome position: 84.78

GC content: 61.59

Gene sequence:

>591_bases
ATGCGCCTTACGAAAACCCGCACCATTGCACGCCTCGGACTGGGAAAGATTGTCGCGCTCCTTGCGAGCCTGTTGATGTG
GGTCACCCCGGCCTTTGCCCAGACCAGCGATCAATATTCTATCCAGGAAGTCGTGGATGCAGGCCACGGATTCTTCGGTG
AAACCACCGGCGGCCTCGCCAAGGTGGTGGAGCGCGCCTTCCAGCAATATGGTCTTCCGAACGGTTATATTCTCGGCCAG
GAAGGTTCCGGCGCCTTCGTTGCCGGCCTCACCTATGGTGAAGGCACGCTTTACACCAAGAATGCCGGCCAGCACCCCGT
CTTCTGGCAGGGCCCGTCGCTCGGCCTCGATTATGGCGGTCAGGGCACCCGCGCCATGATGCTGGTGTACAACCTGCCCT
CGGTCGACGCGCTTTATCGCCGTTACGGCGGCGTCAGCGGCTCCGCCTTCATCGTCGCCGGCGTCGGCATGACCTATCTG
AAAAGCAGCGATGTGACGCTCGCCCCCATCCGCACCGGCATCGGCGCGCGCCTCGGCATCAATGTCGGTTATCTGAAACT
TACCCAGCAGCCAACCTGGAACCCCTTCTGA

Upstream 100 bases:

>100_bases
GAAACATGCTGTAGAACTTTGACTCTACGCATCGGCCCCGCGAAAATCGATTCGGTTTTTCGGGCTGATGCGTTAACGAA
ACAGACGGACGGACATGACG

Downstream 100 bases:

>100_bases
TAAGACAAGACGGTCGCGGCTTGTTCTTCTCTCCATGGGGGCGAAGGTAGCCCGAAGGGTCGGATGAGGGGGGCAAGGTT
GCCGAATATCTCTACCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLAKVVERAFQQYGLPNGYILGQ
EGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGGQGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYL
KSSDVTLAPIRTGIGARLGINVGYLKLTQQPTWNPF

Sequences:

>Translated_196_residues
MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLAKVVERAFQQYGLPNGYILGQ
EGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGGQGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYL
KSSDVTLAPIRTGIGARLGINVGYLKLTQQPTWNPF
>Mature_196_residues
MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLAKVVERAFQQYGLPNGYILGQ
EGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGGQGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYL
KSSDVTLAPIRTGIGARLGINVGYLKLTQQPTWNPF

Specific function: Unknown

COG id: COG5400

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20922; Mature: 20922

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHH
KVVERAFQQYGLPNGYILGQEGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGG
HHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCEEEECCCCCCCEEECCCCCCCCCCC
QGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYLKSSDVTLAPIRTGIGARLGI
CCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCEEEEHHCCCCCEECC
NVGYLKLTQQPTWNPF
EEEEEEEECCCCCCCC
>Mature Secondary Structure
MRLTKTRTIARLGLGKIVALLASLLMWVTPAFAQTSDQYSIQEVVDAGHGFFGETTGGLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHH
KVVERAFQQYGLPNGYILGQEGSGAFVAGLTYGEGTLYTKNAGQHPVFWQGPSLGLDYGG
HHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCEEEECCCCCCCEEECCCCCCCCCCC
QGTRAMMLVYNLPSVDALYRRYGGVSGSAFIVAGVGMTYLKSSDVTLAPIRTGIGARLGI
CCCEEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCEEEEHHCCCCCEECC
NVGYLKLTQQPTWNPF
EEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA