Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185176
Identifier: 159185176
GI number: 159185176
Start: 2342176
End: 2343324
Strand: Direct
Name: 159185176
Synonym: Atu2369
Alternate gene names: NA
Gene position: 2342176-2343324 (Clockwise)
Preceding gene: 159185175
Following gene: 159185178
Centisome position: 82.43
GC content: 58.75
Gene sequence:
>1149_bases ATGCACACCCATAGTGGCAATGGCAACAGCGATCAGTCGACACAACGCCCGGTTCAGCTGAGCGCAACCGGTATTCGCCC CATGCGCAGGGATGACCTACCCGCCGTCGAGGCCGTGCTCAACAGCGCCTTCAAGAAAACCGGGCAGGAGCGCAACTTCG ACTTCCGCTCTTATATCGAAAGACTGTTCTTCGGCAGTCCCGTCTTCAGCCCGGAAAACGGCAGCGTCGTCTACGACACT GGCGAAAGGGTCACGAGCGTCATCCTCGCCATACCCATGCGTTTTGTCGTGCATGGAAAAACCATTACCGCGAGGCTGCT GTGCGCCTTCGCATCGGACGGCAAACTTGGTGCGCTCGGAGCAGCGCGCCTCTCGCGCGGCATGCGGGCATCAAAACACG ACCTGTTGTTCTCGGATACGGCCTCCCCCGTCAGTGCCGATCACTGGGTGGCGATCGGCGGCAATATGCTGCCGATCGAA AGCCTGCAATGGCACAAGGCGCTGAAGCCCTTCTGCACGATCGCTCTGCGCATGCCCCGCCGTTCGAAGCTGGCCAAAAC CACGCTTGCCCTGACGGCGCTTGGCTTCGTGGATGGAATCCTGCGACGCTGGAAGAAGGGTTTAAGGCCGCATGAGGTCG CCGGCGCCAGGGTGAGAACCGTGGATTGCGAAACCTTCCGCCGCGAAGCGCTCGCAAAGATCGAACGGTTTTCCATTCGC CCGGAATGGTCCCACGAGGAGTTTCATTGGCTGGTGAAGATGAGCCGGGCCAATGAAAGCCTCGGCGAACTGAAAAGCCT GGTGATCGAGAATGCCGAAGGCCATGTCATGGGCGCCGCGCTGTTTTTCGGCCAGCGGGGACGGACGGCCTATGTGCTCA ATCTCGTCTGCGACGCCGGTCGCGAAAATGATGTTCTCAACACCCTGTTCTGCCATTTCGATGACGAGAATTATGCCCAC ATCACCGGCATGTCACAGCCCTTTCTCATAAACGCGCTTTATCGCCAGAACCATATGAGCTTTCGCCATGACGGCTATTT CTGCATGGCCACCCGCGATGACGCTCTGAGGGAAAAGGCGCTGGCCGGGGATATCTATATTGGCGGGTTGTGCTCGGAAA GCTGGAGCAAGCTCATCACCGACTATTAA
Upstream 100 bases:
>100_bases TTCACGGGTTTTATATCTATATTAAGAAGTTCAAATATACGCTGCCTATGGTTGATTTCGTAAATGCGCAAAAAGCTGGA GGCCGGCGGTGGACGTTCAG
Downstream 100 bases:
>100_bases GGTCACTGCCCGACGCCGCACCGGAACAGGCGCGACGTCCTCAAGCCTTGGTAAAACGCCCGACATTGGCAGCGATGAGA TGGCGCAATGCTTTCGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MHTHSGNGNSDQSTQRPVQLSATGIRPMRRDDLPAVEAVLNSAFKKTGQERNFDFRSYIERLFFGSPVFSPENGSVVYDT GERVTSVILAIPMRFVVHGKTITARLLCAFASDGKLGALGAARLSRGMRASKHDLLFSDTASPVSADHWVAIGGNMLPIE SLQWHKALKPFCTIALRMPRRSKLAKTTLALTALGFVDGILRRWKKGLRPHEVAGARVRTVDCETFRREALAKIERFSIR PEWSHEEFHWLVKMSRANESLGELKSLVIENAEGHVMGAALFFGQRGRTAYVLNLVCDAGRENDVLNTLFCHFDDENYAH ITGMSQPFLINALYRQNHMSFRHDGYFCMATRDDALREKALAGDIYIGGLCSESWSKLITDY
Sequences:
>Translated_382_residues MHTHSGNGNSDQSTQRPVQLSATGIRPMRRDDLPAVEAVLNSAFKKTGQERNFDFRSYIERLFFGSPVFSPENGSVVYDT GERVTSVILAIPMRFVVHGKTITARLLCAFASDGKLGALGAARLSRGMRASKHDLLFSDTASPVSADHWVAIGGNMLPIE SLQWHKALKPFCTIALRMPRRSKLAKTTLALTALGFVDGILRRWKKGLRPHEVAGARVRTVDCETFRREALAKIERFSIR PEWSHEEFHWLVKMSRANESLGELKSLVIENAEGHVMGAALFFGQRGRTAYVLNLVCDAGRENDVLNTLFCHFDDENYAH ITGMSQPFLINALYRQNHMSFRHDGYFCMATRDDALREKALAGDIYIGGLCSESWSKLITDY >Mature_382_residues MHTHSGNGNSDQSTQRPVQLSATGIRPMRRDDLPAVEAVLNSAFKKTGQERNFDFRSYIERLFFGSPVFSPENGSVVYDT GERVTSVILAIPMRFVVHGKTITARLLCAFASDGKLGALGAARLSRGMRASKHDLLFSDTASPVSADHWVAIGGNMLPIE SLQWHKALKPFCTIALRMPRRSKLAKTTLALTALGFVDGILRRWKKGLRPHEVAGARVRTVDCETFRREALAKIERFSIR PEWSHEEFHWLVKMSRANESLGELKSLVIENAEGHVMGAALFFGQRGRTAYVLNLVCDAGRENDVLNTLFCHFDDENYAH ITGMSQPFLINALYRQNHMSFRHDGYFCMATRDDALREKALAGDIYIGGLCSESWSKLITDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42798; Mature: 42798
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTHSGNGNSDQSTQRPVQLSATGIRPMRRDDLPAVEAVLNSAFKKTGQERNFDFRSYIE CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RLFFGSPVFSPENGSVVYDTGERVTSVILAIPMRFVVHGKTITARLLCAFASDGKLGALG HHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHEEECCHHEEHHHHHHCCCCCCCHHH AARLSRGMRASKHDLLFSDTASPVSADHWVAIGGNMLPIESLQWHKALKPFCTIALRMPR HHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC RSKLAKTTLALTALGFVDGILRRWKKGLRPHEVAGARVRTVDCETFRREALAKIERFSIR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCC PEWSHEEFHWLVKMSRANESLGELKSLVIENAEGHVMGAALFFGQRGRTAYVLNLVCDAG CCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCC RENDVLNTLFCHFDDENYAHITGMSQPFLINALYRQNHMSFRHDGYFCMATRDDALREKA CCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHH LAGDIYIGGLCSESWSKLITDY HHCCEEECCCCHHHHHHHHCCC >Mature Secondary Structure MHTHSGNGNSDQSTQRPVQLSATGIRPMRRDDLPAVEAVLNSAFKKTGQERNFDFRSYIE CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RLFFGSPVFSPENGSVVYDTGERVTSVILAIPMRFVVHGKTITARLLCAFASDGKLGALG HHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHEEECCHHEEHHHHHHCCCCCCCHHH AARLSRGMRASKHDLLFSDTASPVSADHWVAIGGNMLPIESLQWHKALKPFCTIALRMPR HHHHHCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC RSKLAKTTLALTALGFVDGILRRWKKGLRPHEVAGARVRTVDCETFRREALAKIERFSIR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCC PEWSHEEFHWLVKMSRANESLGELKSLVIENAEGHVMGAALFFGQRGRTAYVLNLVCDAG CCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCC RENDVLNTLFCHFDDENYAHITGMSQPFLINALYRQNHMSFRHDGYFCMATRDDALREKA CCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHH LAGDIYIGGLCSESWSKLITDY HHCCEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA