Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185105
Identifier: 159185105
GI number: 159185105
Start: 2189836
End: 2190123
Strand: Reverse
Name: 159185105
Synonym: Atu2221
Alternate gene names: NA
Gene position: 2190123-2189836 (Counterclockwise)
Preceding gene: 159185106
Following gene: 159185104
Centisome position: 77.07
GC content: 54.17
Gene sequence:
>288_bases ATGCTGCATGTGAACAGCTGGAAAGAATTCGTATGGGTCTTGACCGGCTTCATGGGCCAGATGCTGTTCACCATGCGTTT TCTGGTTCAATGGATTTCCTCTGAAAGGGCGAGCCGCTCGGTCATGCCGGTCGCCTTCTGGTATTTTTCCATTCTCGGCG GTGTGGTGCTGCTTTCTTATGCACTGTGGCGGCGCGACCCGGTCTTTGTTATCGGGCAGGCGTCAGGCCTTCTCATCTAT GCTCGAAATCTCTGGTTGATCCATGCAGAACGCCGCCAGCATGCATGA
Upstream 100 bases:
>100_bases TGATCGGCGTCGTCTGGCTATTGCGCCGGCGCAAGCGGTCAAGCTGGGCTGAAACCTTCAAAACGGAGACATCGCCGTGA ATGCACCGGCTTTATGGTCC
Downstream 100 bases:
>100_bases CGGCGTGGCCTTGCCTCATGCGCAGGCAAGCGAACAGCATCGGTGGCTGACGTTTGCGATCGCGGCGATCATTGTCGTGA CAGTGCTGCGGGTTGTTGGG
Product: Lipid A biosynthesis protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Domain Protein; Lipid A Biosynthesis; Lipid A Biosynthesis-Like; Lipid-A-Disaccharide Synthase Domain-Containing Protein; Transport-Related Membrane Protein; Lipid A Biosynthesis N-Terminal; Lipid-A-Disaccharide Synthase; Lipid A Biosynthesis Protein; Lipid A Biosynthesis N-Terminal Domain Family; LAB_N Domain-Containing Protein; Lipid A Disaccharide Synthase; Lipid A Biosynthesis N-Terminal Domain Protein
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLHVNSWKEFVWVLTGFMGQMLFTMRFLVQWISSERASRSVMPVAFWYFSILGGVVLLSYALWRRDPVFVIGQASGLLIY ARNLWLIHAERRQHA
Sequences:
>Translated_95_residues MLHVNSWKEFVWVLTGFMGQMLFTMRFLVQWISSERASRSVMPVAFWYFSILGGVVLLSYALWRRDPVFVIGQASGLLIY ARNLWLIHAERRQHA >Mature_95_residues MLHVNSWKEFVWVLTGFMGQMLFTMRFLVQWISSERASRSVMPVAFWYFSILGGVVLLSYALWRRDPVFVIGQASGLLIY ARNLWLIHAERRQHA
Specific function: Unknown
COG id: COG3952
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11191; Mature: 11191
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHVNSWKEFVWVLTGFMGQMLFTMRFLVQWISSERASRSVMPVAFWYFSILGGVVLLSY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALWRRDPVFVIGQASGLLIYARNLWLIHAERRQHA HHHCCCCEEEEECCCCEEEEEECEEEEECCCCCCC >Mature Secondary Structure MLHVNSWKEFVWVLTGFMGQMLFTMRFLVQWISSERASRSVMPVAFWYFSILGGVVLLSY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALWRRDPVFVIGQASGLLIYARNLWLIHAERRQHA HHHCCCCEEEEECCCCEEEEEECEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA