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The map label for this gene is petR [H]

Identifier: 159185100

GI number: 159185100

Start: 2176438

End: 2177151

Strand: Direct

Name: petR [H]

Synonym: Atu2206

Alternate gene names: 159185100

Gene position: 2176438-2177151 (Clockwise)

Preceding gene: 15889482

Following gene: 15889484

Centisome position: 76.59

GC content: 60.5

Gene sequence:

>714_bases
ATGGCACAAGCTCCGACCAACCGCGTGCCGGTGGATGACGATGCGGCCCATCTGCTGATCGTCGACGATGACGCCCGCAT
TCGCAATCTCCTGCAACGATTCCTTGGCGACAAGGGCTATCGCGTCTCGGTGGCCGGCGACGCGGCCGAAGCACGGCGCA
AGATGGTGGGCATCCGTTTCGATCTGCTGATCCTCGACGTGATGATGCCCGGCGAAAACGGGCTTTCGCTGACCCGTTCA
CTGAACGAGAACAAATCCGTGCCGGTCATTCTCCTGACCGCCCGTTCGGAAGCGGATTCGCGCATTGCCGGATTGGAAGC
GGGCGCCGATGACTATCTCGCCAAGCCCTTCGATCCGCGCGAGCTTGTCCTGCGCATCAACAATATCCTGCGGCGCAACA
CCTCGCCCGATACGCCCAAGATCGAACAGATCATGTTCGGCCCCTACAGCTTCTCCATTCCGAAGAGGGAATTGCGACGC
GGTGCCGAAACGATCCGGCTGACGGACCGTGAACAGGAAATCATGCTGCTTTTCGCCCTGCGCGCCGGCGATACCATTCC
GCGCCACGAGCTCGTGGAGGCGGAATCGGAAGTGGGTGAAAGAACCATCGACGTGCAAATCAACCGTCTTCGCCGCAAGA
TCGAGGACGACCCTGCCAATCCTGTCTATCTGCAAACGGTGCGTGGCATCGGTTACCGCCTGAGCGTGGACTGA

Upstream 100 bases:

>100_bases
TCGACCGCGCGCTGGAAGGGCTGGGACCGGATGCCCGCGCCTGCGTGCGCAAGTTCCTGGCGCAGATGCGCAGCCCGACA
AGCGTGGAGGGTGAATGACG

Downstream 100 bases:

>100_bases
CGGGCACTCAAAGAAGGGCAAACGCACGACCATGGCGAGCCTCGATTTTTTCGACACGTTCAAAAAGAGCCCCGTGGCCA
AGGCATGGCGCTCCGCCGGC

Product: two component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MAQAPTNRVPVDDDAAHLLIVDDDARIRNLLQRFLGDKGYRVSVAGDAAEARRKMVGIRFDLLILDVMMPGENGLSLTRS
LNENKSVPVILLTARSEADSRIAGLEAGADDYLAKPFDPRELVLRINNILRRNTSPDTPKIEQIMFGPYSFSIPKRELRR
GAETIRLTDREQEIMLLFALRAGDTIPRHELVEAESEVGERTIDVQINRLRRKIEDDPANPVYLQTVRGIGYRLSVD

Sequences:

>Translated_237_residues
MAQAPTNRVPVDDDAAHLLIVDDDARIRNLLQRFLGDKGYRVSVAGDAAEARRKMVGIRFDLLILDVMMPGENGLSLTRS
LNENKSVPVILLTARSEADSRIAGLEAGADDYLAKPFDPRELVLRINNILRRNTSPDTPKIEQIMFGPYSFSIPKRELRR
GAETIRLTDREQEIMLLFALRAGDTIPRHELVEAESEVGERTIDVQINRLRRKIEDDPANPVYLQTVRGIGYRLSVD
>Mature_236_residues
AQAPTNRVPVDDDAAHLLIVDDDARIRNLLQRFLGDKGYRVSVAGDAAEARRKMVGIRFDLLILDVMMPGENGLSLTRSL
NENKSVPVILLTARSEADSRIAGLEAGADDYLAKPFDPRELVLRINNILRRNTSPDTPKIEQIMFGPYSFSIPKRELRRG
AETIRLTDREQEIMLLFALRAGDTIPRHELVEAESEVGERTIDVQINRLRRKIEDDPANPVYLQTVRGIGYRLSVD

Specific function: Necessary for photosynthetic and respiratory growth. Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=224, Percent_Identity=42.4107142857143, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=38.0952380952381, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=36.3636363636364, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=34.375, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=33.6363636363636, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1788394, Length=235, Percent_Identity=30.6382978723404, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=34.2105263157895, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=37.0689655172414, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=33.7837837837838, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=35.4545454545455, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=31.0810810810811, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=32.8888888888889, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=28.8888888888889, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI145693140, Length=228, Percent_Identity=29.3859649122807, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=32.03125, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790437, Length=133, Percent_Identity=32.3308270676692, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=31.304347826087, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788713, Length=101, Percent_Identity=43.5643564356436, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI145693157, Length=112, Percent_Identity=33.9285714285714, Blast_Score=62, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=104, Percent_Identity=34.6153846153846, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26701; Mature: 26570

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAPTNRVPVDDDAAHLLIVDDDARIRNLLQRFLGDKGYRVSVAGDAAEARRKMVGIRF
CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCEE
DLLILDVMMPGENGLSLTRSLNENKSVPVILLTARSEADSRIAGLEAGADDYLAKPFDPR
EEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHH
ELVLRINNILRRNTSPDTPKIEQIMFGPYSFSIPKRELRRGAETIRLTDREQEIMLLFAL
HHHHHHHHHHHCCCCCCCCCHHHEEECCEECCCCHHHHHCCCCEEEECCCCCEEEEEEEE
RAGDTIPRHELVEAESEVGERTIDVQINRLRRKIEDDPANPVYLQTVRGIGYRLSVD
CCCCCCCHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCEEEEEECCCCEEEECC
>Mature Secondary Structure 
AQAPTNRVPVDDDAAHLLIVDDDARIRNLLQRFLGDKGYRVSVAGDAAEARRKMVGIRF
CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCEE
DLLILDVMMPGENGLSLTRSLNENKSVPVILLTARSEADSRIAGLEAGADDYLAKPFDPR
EEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHH
ELVLRINNILRRNTSPDTPKIEQIMFGPYSFSIPKRELRRGAETIRLTDREQEIMLLFAL
HHHHHHHHHHHCCCCCCCCCHHHEEECCEECCCCHHHHHCCCCEEEECCCCCEEEEEEEE
RAGDTIPRHELVEAESEVGERTIDVQINRLRRKIEDDPANPVYLQTVRGIGYRLSVD
CCCCCCCHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCEEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]