Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is adh [C]
Identifier: 159185076
GI number: 159185076
Start: 2115801
End: 2116844
Strand: Direct
Name: adh [C]
Synonym: Atu2151
Alternate gene names: 159185076
Gene position: 2115801-2116844 (Clockwise)
Preceding gene: 15889431
Following gene: 15889434
Centisome position: 74.46
GC content: 63.98
Gene sequence:
>1044_bases ATGCGCGCGCTTTATTACGAACGATTCGGCGAGACCCCTGTAGTCGCGTCCCTGCCTGATCCGGCACCGAGCGATGGCGG CGTGGTGATTGCGGTGAAGGCAACCGGCCTCTGCCGCAGCGACTGGCATGGCTGGATGGGACATGACACGGATATCCGTC TGCCGCATGTGCCCGGCCACGAGTTCGCCGGCGTCATCTCCGCAGTCGGCAGAAACGTCACCCGCTTCAAGACGGGTGAT CGCGTTACCGTGCCTTTCGTCTCCGGCTGCGGCCATTGCCATGAGTGCCGCTCCGGCAATCAGCAGGTCTGCGAAACGCA GTTCCAGCCCGGCTTCACCCATTGGGGTTCCTTCGCCGAATATGTCGCCATCGACTATGCCGATCAGAACCTCGTGCACC TGCCGGAATCGATGAGTTACGCCACCGCCGCCGGCCTCGGTTGCCGTTTCGCCACCTCCTTCCGGGCGGTGACGGATCAG GGACGCCTGAAGGGCGGCGAATGGCTGGCTGTCCATGGCTGCGGCGGTGTCGGTCTCTCCGCCATCATGATCGGCGCCGG CCTCGGCGCACAGGTCGTCGCCATCGATATTGCCGAAGACAAGCTCGAACTCGCCCGGCAACTGGGTGCAACCGCAACCA TCAACAGCCGCTCCGTTGCCGATGTCGCCGAAGCGGTGCGCGACATCACCGGTGGCGGCGCGCATGTGTCGGTGGATGCG CTTGGCCATCCGCAGACCTGCTGCAATTCCATCAGCAACCTGCGCCGGCGCGGACGCCATGTGCAGGTGGGGCTGATGCT GGCAGACCATGCCATGCCGGCCATTCCCATGGCCCGGGTGATCGCTCATGAGCTGGAGATCTATGGCAGCCACGGCATGC AGGCATGGCGTTACGAGGACATGCTGGCCATGATCGAAAGCGGCAGGCTTGCGCCGGAAAAGCTGATTGGCCGCCATATC TCGCTGACCGAAGCGGCCGTCGCCCTGCCCGGAATGGATAGGTTCCAGGAGAGCGGCATCAGCATCATCGACCGGTTCGA ATAG
Upstream 100 bases:
>100_bases GACTGAAGCGCTTCCCCAGACGTAAAACGGCTTCGCACTTTTGCTGAAAATGCTCTAGAGCAGGTTCGGATTGAACCTGC GGACCAATGATGAGGCCATG
Downstream 100 bases:
>100_bases TACCGGTCGCAGCCATTCGGTTTCGCTTCACTTGGTCCTGCGCCCAAAAGCCCGGGCCGTGCCGCCTGTCGGGGGTGAGG CCTCCACCGGCGGGGGCGCC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: ADH-HT [H]
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRALYYERFGETPVVASLPDPAPSDGGVVIAVKATGLCRSDWHGWMGHDTDIRLPHVPGHEFAGVISAVGRNVTRFKTGD RVTVPFVSGCGHCHECRSGNQQVCETQFQPGFTHWGSFAEYVAIDYADQNLVHLPESMSYATAAGLGCRFATSFRAVTDQ GRLKGGEWLAVHGCGGVGLSAIMIGAGLGAQVVAIDIAEDKLELARQLGATATINSRSVADVAEAVRDITGGGAHVSVDA LGHPQTCCNSISNLRRRGRHVQVGLMLADHAMPAIPMARVIAHELEIYGSHGMQAWRYEDMLAMIESGRLAPEKLIGRHI SLTEAAVALPGMDRFQESGISIIDRFE
Sequences:
>Translated_347_residues MRALYYERFGETPVVASLPDPAPSDGGVVIAVKATGLCRSDWHGWMGHDTDIRLPHVPGHEFAGVISAVGRNVTRFKTGD RVTVPFVSGCGHCHECRSGNQQVCETQFQPGFTHWGSFAEYVAIDYADQNLVHLPESMSYATAAGLGCRFATSFRAVTDQ GRLKGGEWLAVHGCGGVGLSAIMIGAGLGAQVVAIDIAEDKLELARQLGATATINSRSVADVAEAVRDITGGGAHVSVDA LGHPQTCCNSISNLRRRGRHVQVGLMLADHAMPAIPMARVIAHELEIYGSHGMQAWRYEDMLAMIESGRLAPEKLIGRHI SLTEAAVALPGMDRFQESGISIIDRFE >Mature_347_residues MRALYYERFGETPVVASLPDPAPSDGGVVIAVKATGLCRSDWHGWMGHDTDIRLPHVPGHEFAGVISAVGRNVTRFKTGD RVTVPFVSGCGHCHECRSGNQQVCETQFQPGFTHWGSFAEYVAIDYADQNLVHLPESMSYATAAGLGCRFATSFRAVTDQ GRLKGGEWLAVHGCGGVGLSAIMIGAGLGAQVVAIDIAEDKLELARQLGATATINSRSVADVAEAVRDITGGGAHVSVDA LGHPQTCCNSISNLRRRGRHVQVGLMLADHAMPAIPMARVIAHELEIYGSHGMQAWRYEDMLAMIESGRLAPEKLIGRHI SLTEAAVALPGMDRFQESGISIIDRFE
Specific function: Thermophilic NAD(+)-dependent alcohol dehydrogenase. Bears mainly an ethanol-dehydrogenase activity [H]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI71743840, Length=278, Percent_Identity=28.7769784172662, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI262073058, Length=278, Percent_Identity=28.7769784172662, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI4501933, Length=250, Percent_Identity=30, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI34577061, Length=284, Percent_Identity=28.8732394366197, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI4501929, Length=247, Percent_Identity=29.5546558704453, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI71565154, Length=244, Percent_Identity=30.327868852459, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI156523966, Length=244, Percent_Identity=28.2786885245902, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4501939, Length=244, Percent_Identity=28.2786885245902, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI71565152, Length=246, Percent_Identity=29.2682926829268, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI194239674, Length=269, Percent_Identity=29.7397769516729, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI13236495, Length=269, Percent_Identity=29.7397769516729, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI194239676, Length=224, Percent_Identity=32.1428571428571, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI156627571, Length=334, Percent_Identity=23.9520958083832, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI1787863, Length=349, Percent_Identity=28.080229226361, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI87082125, Length=320, Percent_Identity=28.4375, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87081918, Length=295, Percent_Identity=31.5254237288136, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1790045, Length=330, Percent_Identity=29.6969696969697, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1786825, Length=383, Percent_Identity=25.5874673629243, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788073, Length=311, Percent_Identity=27.3311897106109, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI226510992, Length=249, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786552, Length=283, Percent_Identity=30.0353356890459, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1788075, Length=341, Percent_Identity=25.8064516129032, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1788407, Length=318, Percent_Identity=27.0440251572327, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786518, Length=275, Percent_Identity=28, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790718, Length=335, Percent_Identity=23.8805970149254, Blast_Score=75, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71988145, Length=292, Percent_Identity=29.4520547945205, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17562582, Length=266, Percent_Identity=28.1954887218045, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562584, Length=290, Percent_Identity=26.8965517241379, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17565904, Length=207, Percent_Identity=31.8840579710145, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI25146526, Length=219, Percent_Identity=31.0502283105023, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71997431, Length=214, Percent_Identity=31.3084112149533, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562878, Length=320, Percent_Identity=28.75, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17562876, Length=324, Percent_Identity=28.3950617283951, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6324486, Length=265, Percent_Identity=32.4528301886792, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6323961, Length=265, Percent_Identity=32.8301886792453, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6319621, Length=266, Percent_Identity=30.8270676691729, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323729, Length=350, Percent_Identity=28.2857142857143, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320033, Length=288, Percent_Identity=28.125, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6319258, Length=347, Percent_Identity=28.8184438040346, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319955, Length=340, Percent_Identity=28.2352941176471, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6322619, Length=340, Percent_Identity=28.2352941176471, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6323980, Length=220, Percent_Identity=29.5454545454545, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319949, Length=206, Percent_Identity=30.5825242718447, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI17737895, Length=334, Percent_Identity=26.9461077844311, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI17137530, Length=324, Percent_Identity=27.1604938271605, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI17737897, Length=321, Percent_Identity=26.4797507788162, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 37198; Mature: 37198
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALYYERFGETPVVASLPDPAPSDGGVVIAVKATGLCRSDWHGWMGHDTDIRLPHVPGH CCCCCHHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCH EFAGVISAVGRNVTRFKTGDRVTVPFVSGCGHCHECRSGNQQVCETQFQPGFTHWGSFAE HHHHHHHHHCCCCEEEECCCEEEEEHHCCCCCHHHHCCCCHHHHHHCCCCCCHHHCCHHH YVAIDYADQNLVHLPESMSYATAAGLGCRFATSFRAVTDQGRLKGGEWLAVHGCGGVGLS EEEEECCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHH AIMIGAGLGAQVVAIDIAEDKLELARQLGATATINSRSVADVAEAVRDITGGGAHVSVDA HHHHHCCCCCEEEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEC LGHPQTCCNSISNLRRRGRHVQVGLMLADHAMPAIPMARVIAHELEIYGSHGMQAWRYED CCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH MLAMIESGRLAPEKLIGRHISLTEAAVALPGMDRFQESGISIIDRFE HHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCCEECCC >Mature Secondary Structure MRALYYERFGETPVVASLPDPAPSDGGVVIAVKATGLCRSDWHGWMGHDTDIRLPHVPGH CCCCCHHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCH EFAGVISAVGRNVTRFKTGDRVTVPFVSGCGHCHECRSGNQQVCETQFQPGFTHWGSFAE HHHHHHHHHCCCCEEEECCCEEEEEHHCCCCCHHHHCCCCHHHHHHCCCCCCHHHCCHHH YVAIDYADQNLVHLPESMSYATAAGLGCRFATSFRAVTDQGRLKGGEWLAVHGCGGVGLS EEEEECCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHH AIMIGAGLGAQVVAIDIAEDKLELARQLGATATINSRSVADVAEAVRDITGGGAHVSVDA HHHHHCCCCCEEEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEC LGHPQTCCNSISNLRRRGRHVQVGLMLADHAMPAIPMARVIAHELEIYGSHGMQAWRYED CCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH MLAMIESGRLAPEKLIGRHISLTEAAVALPGMDRFQESGISIIDRFE HHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8020473 [H]