Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185070

Identifier: 159185070

GI number: 159185070

Start: 2105887

End: 2106309

Strand: Reverse

Name: 159185070

Synonym: Atu2141

Alternate gene names: NA

Gene position: 2106309-2105887 (Counterclockwise)

Preceding gene: 15889423

Following gene: 159185069

Centisome position: 74.12

GC content: 51.3

Gene sequence:

>423_bases
ATGACCGGCGATCAGATTGATAAGTCGTGGTTTTCACAACAGCTTAAGAGAAAAGGAAAGAGTCAGGCTGATTTGGCCCG
CTTCCTGAATCTGGACCGCAGCGCGGTGACGCGAATGTTAAATGGGGATCGCAATATGAGCGTGGAGGAGCAGGATCGGA
TTGCTGAATATCTCGAGATTCCGGTCGGCGACGTCGCTCTTCATCGTCGGGGCGGAGTTGCCGGCTTTTCGGAAAACAAC
CAAACGGCCTATTCCGAACCTGCTCCGTCCGGAAGATCAGGCCCTGAGGCAGGCAATGTCAGTACAACTGAAAGTAGACA
TCCGATTTTCGGCTGTATGAAAGGCACGATTACCGTCATGCCCGATGTGGACTTAACCAAACCCGTTGATTTTGAATGGG
GAGAAAAGCTCTACAATGAGTGA

Upstream 100 bases:

>100_bases
GGGAAGTGGCACGCGGTTTCGAGCGAGCGTGAAACCATGGCGTTGTTGAAATCTCAATCGCATAGTATGCTGTTGCTATT
ACCTCAATGGGGGCGTGGCG

Downstream 100 bases:

>100_bases
CGGCTTTCTTCTCGATACATGTGCAGTGATCTGGATGTCGCAGGGTGAACCTGTTTCAGACGAGGCGGTCAGTGCCTTGA
ACCAGTCCTATCGGGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEIPVGDVALHRRGGVAGFSENN
QTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVMPDVDLTKPVDFEWGEKLYNE

Sequences:

>Translated_140_residues
MTGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEIPVGDVALHRRGGVAGFSENN
QTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVMPDVDLTKPVDFEWGEKLYNE
>Mature_139_residues
TGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEIPVGDVALHRRGGVAGFSENNQ
TAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVMPDVDLTKPVDFEWGEKLYNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15551; Mature: 15420

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEI
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
PVGDVALHRRGGVAGFSENNQTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVM
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE
PDVDLTKPVDFEWGEKLYNE
CCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
TGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEI
CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC
PVGDVALHRRGGVAGFSENNQTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVM
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE
PDVDLTKPVDFEWGEKLYNE
CCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA