Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185070
Identifier: 159185070
GI number: 159185070
Start: 2105887
End: 2106309
Strand: Reverse
Name: 159185070
Synonym: Atu2141
Alternate gene names: NA
Gene position: 2106309-2105887 (Counterclockwise)
Preceding gene: 15889423
Following gene: 159185069
Centisome position: 74.12
GC content: 51.3
Gene sequence:
>423_bases ATGACCGGCGATCAGATTGATAAGTCGTGGTTTTCACAACAGCTTAAGAGAAAAGGAAAGAGTCAGGCTGATTTGGCCCG CTTCCTGAATCTGGACCGCAGCGCGGTGACGCGAATGTTAAATGGGGATCGCAATATGAGCGTGGAGGAGCAGGATCGGA TTGCTGAATATCTCGAGATTCCGGTCGGCGACGTCGCTCTTCATCGTCGGGGCGGAGTTGCCGGCTTTTCGGAAAACAAC CAAACGGCCTATTCCGAACCTGCTCCGTCCGGAAGATCAGGCCCTGAGGCAGGCAATGTCAGTACAACTGAAAGTAGACA TCCGATTTTCGGCTGTATGAAAGGCACGATTACCGTCATGCCCGATGTGGACTTAACCAAACCCGTTGATTTTGAATGGG GAGAAAAGCTCTACAATGAGTGA
Upstream 100 bases:
>100_bases GGGAAGTGGCACGCGGTTTCGAGCGAGCGTGAAACCATGGCGTTGTTGAAATCTCAATCGCATAGTATGCTGTTGCTATT ACCTCAATGGGGGCGTGGCG
Downstream 100 bases:
>100_bases CGGCTTTCTTCTCGATACATGTGCAGTGATCTGGATGTCGCAGGGTGAACCTGTTTCAGACGAGGCGGTCAGTGCCTTGA ACCAGTCCTATCGGGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEIPVGDVALHRRGGVAGFSENN QTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVMPDVDLTKPVDFEWGEKLYNE
Sequences:
>Translated_140_residues MTGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEIPVGDVALHRRGGVAGFSENN QTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVMPDVDLTKPVDFEWGEKLYNE >Mature_139_residues TGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEIPVGDVALHRRGGVAGFSENNQ TAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVMPDVDLTKPVDFEWGEKLYNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15551; Mature: 15420
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEI CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC PVGDVALHRRGGVAGFSENNQTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVM CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE PDVDLTKPVDFEWGEKLYNE CCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure TGDQIDKSWFSQQLKRKGKSQADLARFLNLDRSAVTRMLNGDRNMSVEEQDRIAEYLEI CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHC PVGDVALHRRGGVAGFSENNQTAYSEPAPSGRSGPEAGNVSTTESRHPIFGCMKGTITVM CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE PDVDLTKPVDFEWGEKLYNE CCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA