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The map label for this gene is yfiO [C]

Identifier: 159185041

GI number: 159185041

Start: 2044791

End: 2045657

Strand: Reverse

Name: yfiO [C]

Synonym: Atu2084

Alternate gene names: 159185041

Gene position: 2045657-2044791 (Counterclockwise)

Preceding gene: 159185042

Following gene: 15889367

Centisome position: 71.99

GC content: 59.05

Gene sequence:

>867_bases
ATGAAGCATGTAGGGTCTGGTGCAATGAAGGGTACGATGCGGGGGATCGCCGTTTCGTTGATGTTGGTCGGCGCAAGTGT
CGTCGTCACGGCCTGCCAGTCCGATCCGGATATCGACATTACCAAGCTCGGCGTCGAGACCGATCCGCCTGACGTTCTGT
ACAAGCAGGGGCTTGCCAACATGAACGCCGGCAACATGACGGAAGCCTCACGCAAGTTCGAGGCGATCGACAAGCAGTAC
CCCTTCACCGAGTGGGGCCAGAAGGCGCTTGTCATGCAGACATTCATTGCCACGCGCACCAACAAGAACGATGTGGCCAT
CACGTCCGGCAGCCGTTTCCTGCGTCAGTATCCGCGCTCCAAGGATGCCGCCTATGTTCAGTACATGATCGGCCTTGCCT
ATTCGAAGCAGATTTCCGACGTGACGCAGGATCAGCGCGCCGCGCAGCGGACGATCGAAGCGATGAACAAGGTCGTGAAC
GACTATCCGTCTTCGGAATATGTCGCCGATGCACAGGCCAAGATTCGTTTCGCCCGCGACCAGCTCGCCGGCCGTGAAAT
GCAGGTCGGTCGTTATTACCTTGAGCGCAAGGAATATCTCGCCGCCGTTTCGCGCTTCCGCATCGTCGTCGAGCAGTACC
AGAACACCAACCAGATCGAGGAAGCGCTGGCGCGTCTGACCGAAGCCTATTACGCCATGGGCCTGGTGGATGAAGCGCAG
ACCGCGGCCGCCGTTCTCGGCAACAACTATCCCGACAGCCAATGGTATGCAGATTCCTACAAGCTGCTGAAGGGCCAAGG
CCTGGAGCCGCGAGAAAACAAGGGGTCCTGGATTTCGCGCGCCGGCAAGAAGCTCATCGGCGCCTGA

Upstream 100 bases:

>100_bases
TAATGCGTCATCATTGCGTTGCCCTGCGGATGCTTTTATGGCTAGAACGCCAGTGCAAAGCCGATGCTTATGTATTTGCG
CGGGAAGTGGGAACTGTCGA

Downstream 100 bases:

>100_bases
GACGGGGCATAGGCCATGCTGGTCCAGCTCTCCATACGCGACATCGTTCTGATTGAAAGGCTCGACCTCAGTTTTGAGGC
GGGCCTTTCCGTGTTGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKHVGSGAMKGTMRGIAVSLMLVGASVVVTACQSDPDIDITKLGVETDPPDVLYKQGLANMNAGNMTEASRKFEAIDKQY
PFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIGLAYSKQISDVTQDQRAAQRTIEAMNKVVN
DYPSSEYVADAQAKIRFARDQLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQ
TAAAVLGNNYPDSQWYADSYKLLKGQGLEPRENKGSWISRAGKKLIGA

Sequences:

>Translated_288_residues
MKHVGSGAMKGTMRGIAVSLMLVGASVVVTACQSDPDIDITKLGVETDPPDVLYKQGLANMNAGNMTEASRKFEAIDKQY
PFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIGLAYSKQISDVTQDQRAAQRTIEAMNKVVN
DYPSSEYVADAQAKIRFARDQLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQ
TAAAVLGNNYPDSQWYADSYKLLKGQGLEPRENKGSWISRAGKKLIGA
>Mature_288_residues
MKHVGSGAMKGTMRGIAVSLMLVGASVVVTACQSDPDIDITKLGVETDPPDVLYKQGLANMNAGNMTEASRKFEAIDKQY
PFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIGLAYSKQISDVTQDQRAAQRTIEAMNKVVN
DYPSSEYVADAQAKIRFARDQLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQ
TAAAVLGNNYPDSQWYADSYKLLKGQGLEPRENKGSWISRAGKKLIGA

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=253, Percent_Identity=26.8774703557312, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32094; Mature: 32094

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHVGSGAMKGTMRGIAVSLMLVGASVVVTACQSDPDIDITKLGVETDPPDVLYKQGLAN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCC
MNAGNMTEASRKFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRS
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCC
KDAAYVQYMIGLAYSKQISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQAKIRFARD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TAAAVLGNNYPDSQWYADSYKLLKGQGLEPRENKGSWISRAGKKLIGA
HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKHVGSGAMKGTMRGIAVSLMLVGASVVVTACQSDPDIDITKLGVETDPPDVLYKQGLAN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCC
MNAGNMTEASRKFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRS
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCC
KDAAYVQYMIGLAYSKQISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQAKIRFARD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QLAGREMQVGRYYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TAAAVLGNNYPDSQWYADSYKLLKGQGLEPRENKGSWISRAGKKLIGA
HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]