Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159185020
Identifier: 159185020
GI number: 159185020
Start: 1992921
End: 1993289
Strand: Reverse
Name: 159185020
Synonym: Atu2034
Alternate gene names: NA
Gene position: 1993289-1992921 (Counterclockwise)
Preceding gene: 15889323
Following gene: 159185019
Centisome position: 70.15
GC content: 57.45
Gene sequence:
>369_bases ATGGTTGAATTATCCGCTTCACATCTAGACACTGTCTTTCATGCCCTTGGCGACGCAACGCGACGCACGATGCTGCGTGA TCTTTCCCGTGGCGAGCGAACGGTGAGCCAGTTGGCTCAACCCTTCGACATATCGCTCGCGGCAGCCTCGAAGCATATCA AGGCGCTGGAAAATGCGGGGCTTATCCGCCGCGAGGTGAGGGGGCGCATCCATGTCTGCCGCCTTGCGCCGGAACCCCTA GCGGAAGCGCATGAATGGCTGGATTTCTACCGGCAGTTCTGGGGCAATCGCCTCGATGTTCTTGAGCAGATGCTCAGGGA GGAAGATCAGGGAAAATCCCCTGCAGATGGAGGAAATGACAATGGCTGA
Upstream 100 bases:
>100_bases AAAGCCCGCGGTTCGCCGCGGGTTTTTTTATGGAATCCGCTTGGGATCGATATTCAACCATGTGGTTGACATTCCGCGGC GACCGGCTATATTCAACAAC
Downstream 100 bases:
>100_bases TATCGCAATGCCTGAAACCTATGGCCGTCTCGTCGAGCCAACGACCCTGAAGATCGAGCGGCTGTTGCCCGGACCGATCG AGCGGGTCTGGGCTTATCTG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Arsr Family; ArsR Family Regulatory; Transcriptional Regulator TrmB; Transcription Regulator ArsR; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Arsenical Resistance Operon Repressor; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; ArsR Family xin-Antitoxin System Antitoxin Component; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator Arsr Domain Protein; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MVELSASHLDTVFHALGDATRRTMLRDLSRGERTVSQLAQPFDISLAAASKHIKALENAGLIRREVRGRIHVCRLAPEPL AEAHEWLDFYRQFWGNRLDVLEQMLREEDQGKSPADGGNDNG
Sequences:
>Translated_122_residues MVELSASHLDTVFHALGDATRRTMLRDLSRGERTVSQLAQPFDISLAAASKHIKALENAGLIRREVRGRIHVCRLAPEPL AEAHEWLDFYRQFWGNRLDVLEQMLREEDQGKSPADGGNDNG >Mature_122_residues MVELSASHLDTVFHALGDATRRTMLRDLSRGERTVSQLAQPFDISLAAASKHIKALENAGLIRREVRGRIHVCRLAPEPL AEAHEWLDFYRQFWGNRLDVLEQMLREEDQGKSPADGGNDNG
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13749; Mature: 13749
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELSASHLDTVFHALGDATRRTMLRDLSRGERTVSQLAQPFDISLAAASKHIKALENAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LIRREVRGRIHVCRLAPEPLAEAHEWLDFYRQFWGNRLDVLEQMLREEDQGKSPADGGND HHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC NG CC >Mature Secondary Structure MVELSASHLDTVFHALGDATRRTMLRDLSRGERTVSQLAQPFDISLAAASKHIKALENAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LIRREVRGRIHVCRLAPEPLAEAHEWLDFYRQFWGNRLDVLEQMLREEDQGKSPADGGND HHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC NG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA