Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185006
Identifier: 159185006
GI number: 159185006
Start: 1958528
End: 1959121
Strand: Direct
Name: 159185006
Synonym: Atu1995
Alternate gene names: NA
Gene position: 1958528-1959121 (Clockwise)
Preceding gene: 15889285
Following gene: 159185007
Centisome position: 68.92
GC content: 56.06
Gene sequence:
>594_bases ATGGAGGCCGCCGTCAATGCCGCAGAAGCCTATTCGCATATCCGTGCGGTCATGGGCATGGTGGTCGGCCTCAGCCTTGC GCGCCTGCTGACCGGCCTTGCCGGTTTCGTGCAGCATCCGAAGAAGGAGCGCATCTATCTTCTGCATATCGGCTGGGTGG CGTTCTTGTTTCTGATGCTGGTGCATTTCTGGTGGTGGGAGCACCGGCTTTCCGCCACCGGTCATGTGCTGGATTTCGGC GCCTTCCTTTTCCTCATCCTATTCTGCTCGCTGTTCTATTTCCTCTGCGTGCTGCTGTTTCCCACTGACATGAAGGAATA CAAGGGATACGAGGACTATTTCTTTTCCCGCAAAAGCTGGTTCTTTGCGTTTCTCGCCGCACTTTTCGTCACTGACGTCG GCGACACACTGCTGAAGGGACATGACTACCTCGCCTCGCTCGGGCCAGAATATCTCATCCGCACTGCTATTTACGTTGTC CTGTTCACAGCGGCCGCCTTCATCGACAATCGCCGCTTTCACCGGTTTCTCGTGATTTTCGCGCTGGTCTACCAGATCGC GTGGATTTTCCGCACCTACGACCTGCTGGCCTGA
Upstream 100 bases:
>100_bases GTTACGACAAGCTGGAAAAGGTCACCGCCGGTACCTTCATCATGGTGGCGATGGACGAAAACGGGCAGCCTACGCCCATT CCTGCGGCGGAGTGAACACG
Downstream 100 bases:
>100_bases AGAACGACCCACCATGTATCGTCATTGTGTCGCGGTGACATTTCGCCGCGAATATGACATTGCGATTGCATGGGATTCAT TCGCAGGATCATGCAGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MEAAVNAAEAYSHIRAVMGMVVGLSLARLLTGLAGFVQHPKKERIYLLHIGWVAFLFLMLVHFWWWEHRLSATGHVLDFG AFLFLILFCSLFYFLCVLLFPTDMKEYKGYEDYFFSRKSWFFAFLAALFVTDVGDTLLKGHDYLASLGPEYLIRTAIYVV LFTAAAFIDNRRFHRFLVIFALVYQIAWIFRTYDLLA
Sequences:
>Translated_197_residues MEAAVNAAEAYSHIRAVMGMVVGLSLARLLTGLAGFVQHPKKERIYLLHIGWVAFLFLMLVHFWWWEHRLSATGHVLDFG AFLFLILFCSLFYFLCVLLFPTDMKEYKGYEDYFFSRKSWFFAFLAALFVTDVGDTLLKGHDYLASLGPEYLIRTAIYVV LFTAAAFIDNRRFHRFLVIFALVYQIAWIFRTYDLLA >Mature_197_residues MEAAVNAAEAYSHIRAVMGMVVGLSLARLLTGLAGFVQHPKKERIYLLHIGWVAFLFLMLVHFWWWEHRLSATGHVLDFG AFLFLILFCSLFYFLCVLLFPTDMKEYKGYEDYFFSRKSWFFAFLAALFVTDVGDTLLKGHDYLASLGPEYLIRTAIYVV LFTAAAFIDNRRFHRFLVIFALVYQIAWIFRTYDLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22942; Mature: 22942
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAAVNAAEAYSHIRAVMGMVVGLSLARLLTGLAGFVQHPKKERIYLLHIGWVAFLFLML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH VHFWWWEHRLSATGHVLDFGAFLFLILFCSLFYFLCVLLFPTDMKEYKGYEDYFFSRKSW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH FFAFLAALFVTDVGDTLLKGHDYLASLGPEYLIRTAIYVVLFTAAAFIDNRRFHRFLVIF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVYQIAWIFRTYDLLA HHHHHHHHHHHHHHHCC >Mature Secondary Structure MEAAVNAAEAYSHIRAVMGMVVGLSLARLLTGLAGFVQHPKKERIYLLHIGWVAFLFLML CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH VHFWWWEHRLSATGHVLDFGAFLFLILFCSLFYFLCVLLFPTDMKEYKGYEDYFFSRKSW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH FFAFLAALFVTDVGDTLLKGHDYLASLGPEYLIRTAIYVVLFTAAAFIDNRRFHRFLVIF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVYQIAWIFRTYDLLA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA