Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is secE
Identifier: 159184992
GI number: 159184992
Start: 1934760
End: 1934960
Strand: Reverse
Name: secE
Synonym: Atu1962
Alternate gene names: NA
Gene position: 1934960-1934760 (Counterclockwise)
Preceding gene: 159184993
Following gene: 15889255
Centisome position: 68.09
GC content: 54.73
Gene sequence:
>201_bases ATGGCATCCAAAACTAATCCGTTTACGTTTCTGCAGCAGGTTCGCGCCGAAGCGTCAAAGATCACTTGGCCGTCGCGCCG CGAGACCATGATTTCGACGGCTATGGTGCTGGTGATGGTCATTTTTGCGGCTCTGTTCTTCTTTGCTGCGGACCAGCTCA TTGGCTGGCTGCTTAGCCTGGTGTTGAACGTCGGCCGGTAA
Upstream 100 bases:
>100_bases TTGTTAAAAGTGGAATCGGTGTTTATGTAGGTCAAAACAGACACGCGGTGCGTGGGGCTGATTAGTTCGGCTTTACGTGC CGTAATTGCGTGGGCAGTCA
Downstream 100 bases:
>100_bases CGGCACGGTCAAAGGCCCGGTAGAAGGATCGAACGGAGAATAAAATGGCAGCGCGCTGGTACATCGTTCACGCATATTCG AATTTCGAAAAGAAGGTCGC
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: Preprotein Translocase SecE Subunit
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MASKTNPFTFLQQVRAEASKITWPSRRETMISTAMVLVMVIFAALFFFAADQLIGWLLSLVLNVGR
Sequences:
>Translated_66_residues MASKTNPFTFLQQVRAEASKITWPSRRETMISTAMVLVMVIFAALFFFAADQLIGWLLSLVLNVGR >Mature_65_residues ASKTNPFTFLQQVRAEASKITWPSRRETMISTAMVLVMVIFAALFFFAADQLIGWLLSLVLNVGR
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7436; Mature: 7305
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKTNPFTFLQQVRAEASKITWPSRRETMISTAMVLVMVIFAALFFFAADQLIGWLLSL CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNVGR HHHCCC >Mature Secondary Structure ASKTNPFTFLQQVRAEASKITWPSRRETMISTAMVLVMVIFAALFFFAADQLIGWLLSL CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNVGR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA