Click here to switch to the map view.

The map label for this gene is 159184974

Identifier: 159184974

GI number: 159184974

Start: 1886631

End: 1887479

Strand: Reverse

Name: 159184974

Synonym: Atu1910

Alternate gene names: NA

Gene position: 1887479-1886631 (Counterclockwise)

Preceding gene: 159184975

Following gene: 159184973

Centisome position: 66.42

GC content: 61.01

Gene sequence:

>849_bases
ATGGATTCCATGCTGGGCGTGGAGCCGGTTCGTGGACTTGCCGAAGAACAGGATGCGGATATTGCCGAAGGCGCTTCGGC
ACAGCCTGTGGTCGATGGCATCGGCACCGATAATCCAGTTGCCGTCTCTCCTCCTCGCCGGCAACAGGGCGCCAGTCAAT
CGCGGCTGATACCGCCGCCGCCAGTTGGCTCCTCTTCCCGCCGCCAGCCGGTGGAGGAAGTCGCAATGCTCATGCCAAAC
GATCCGATGGCGGGTGGCCCGATGCAGAGCAACCGGTCGATGCCGCCAGGCGTCATGCCATCATCCGAAGTTGCCTGCCG
CAGCGAATTGCGCCGCCTCGGCGTCGCCTTCCGCGACGTCGCACGTATTGCCGATGGCCCGACCTGCGGCATCGATTATC
CGATTGAACTCAGCGGTCTTGCCAGCGGCGTTGCCATTCGTCCGGCGGTGAAGCTCAATTGCCAGGTCACGCTTGCCTTC
GCCAAATGGGTGAAGTTCGAACTCGTGCCGTCCTCGCGCTTCCGTTATCTCTCCGGCGTTGGCCGTATCACGCCGATGGG
CGGTTATTCCTGTCGCAAGATGAATTCGCGTTCCAGCAATCCGTGGTCCGAACATGCGCGCGGCAATGCCATCGATATCG
GCACGATCACGCTGAAGAACGGCAAGGAGATCGACGTCCGCAGCAAGAGCTTCTTCGCCTTCCGCGAAAAGGCACTGCTG
AAGGCGGTGAGGTCCGACAGCTGCAAATATTTCTCCACCGTTCTCGGGCCGGGCAGCGATCCCAATCACTGGAACCATTT
CCACTTCGACCTGCGCACCCGCAAGTCCGGTTACAGGCATTGTGACTAA

Upstream 100 bases:

>100_bases
GCAGAGCCAGACCATGCAAGCCCAGACCATGCAAGCCCAGACCATGCCCGGGCAGCAGTTGGCCAGCAACCAGAACGCCG
AAGGCGAGGGCGGCGTGAAC

Downstream 100 bases:

>100_bases
GTCGCGTCGGTCTCGGCACAAGGCCGAGGAAGACGTCGAGCACGGAGAGCGGCTTGTTATCAACTTGCTGCCGATGGCTG
TGGATCCCGGGATAAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Inner Membrane Protein; Extensin Domain-Containing Protein

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MDSMLGVEPVRGLAEEQDADIAEGASAQPVVDGIGTDNPVAVSPPRRQQGASQSRLIPPPPVGSSSRRQPVEEVAMLMPN
DPMAGGPMQSNRSMPPGVMPSSEVACRSELRRLGVAFRDVARIADGPTCGIDYPIELSGLASGVAIRPAVKLNCQVTLAF
AKWVKFELVPSSRFRYLSGVGRITPMGGYSCRKMNSRSSNPWSEHARGNAIDIGTITLKNGKEIDVRSKSFFAFREKALL
KAVRSDSCKYFSTVLGPGSDPNHWNHFHFDLRTRKSGYRHCD

Sequences:

>Translated_282_residues
MDSMLGVEPVRGLAEEQDADIAEGASAQPVVDGIGTDNPVAVSPPRRQQGASQSRLIPPPPVGSSSRRQPVEEVAMLMPN
DPMAGGPMQSNRSMPPGVMPSSEVACRSELRRLGVAFRDVARIADGPTCGIDYPIELSGLASGVAIRPAVKLNCQVTLAF
AKWVKFELVPSSRFRYLSGVGRITPMGGYSCRKMNSRSSNPWSEHARGNAIDIGTITLKNGKEIDVRSKSFFAFREKALL
KAVRSDSCKYFSTVLGPGSDPNHWNHFHFDLRTRKSGYRHCD
>Mature_282_residues
MDSMLGVEPVRGLAEEQDADIAEGASAQPVVDGIGTDNPVAVSPPRRQQGASQSRLIPPPPVGSSSRRQPVEEVAMLMPN
DPMAGGPMQSNRSMPPGVMPSSEVACRSELRRLGVAFRDVARIADGPTCGIDYPIELSGLASGVAIRPAVKLNCQVTLAF
AKWVKFELVPSSRFRYLSGVGRITPMGGYSCRKMNSRSSNPWSEHARGNAIDIGTITLKNGKEIDVRSKSFFAFREKALL
KAVRSDSCKYFSTVLGPGSDPNHWNHFHFDLRTRKSGYRHCD

Specific function: Unknown

COG id: COG3921

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30642; Mature: 30642

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSMLGVEPVRGLAEEQDADIAEGASAQPVVDGIGTDNPVAVSPPRRQQGASQSRLIPPP
CCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCCC
PVGSSSRRQPVEEVAMLMPNDPMAGGPMQSNRSMPPGVMPSSEVACRSELRRLGVAFRDV
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARIADGPTCGIDYPIELSGLASGVAIRPAVKLNCQVTLAFAKWVKFELVPSSRFRYLSGV
HHHCCCCCCCCCCCEEECCCCCCEEECCEEEEEEEEEEEEECEEEEEECCCHHHHHHHCC
GRITPMGGYSCRKMNSRSSNPWSEHARGNAIDIGTITLKNGKEIDVRSKSFFAFREKALL
CCCCCCCCCHHHHCCCCCCCCHHHHCCCCEEEEEEEEECCCCEEECCCHHHHHHHHHHHH
KAVRSDSCKYFSTVLGPGSDPNHWNHFHFDLRTRKSGYRHCD
HHHHCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDSMLGVEPVRGLAEEQDADIAEGASAQPVVDGIGTDNPVAVSPPRRQQGASQSRLIPPP
CCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCCC
PVGSSSRRQPVEEVAMLMPNDPMAGGPMQSNRSMPPGVMPSSEVACRSELRRLGVAFRDV
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ARIADGPTCGIDYPIELSGLASGVAIRPAVKLNCQVTLAFAKWVKFELVPSSRFRYLSGV
HHHCCCCCCCCCCCEEECCCCCCEEECCEEEEEEEEEEEEECEEEEEECCCHHHHHHHCC
GRITPMGGYSCRKMNSRSSNPWSEHARGNAIDIGTITLKNGKEIDVRSKSFFAFREKALL
CCCCCCCCCHHHHCCCCCCCCHHHHCCCCEEEEEEEEECCCCEEECCCHHHHHHHHHHHH
KAVRSDSCKYFSTVLGPGSDPNHWNHFHFDLRTRKSGYRHCD
HHHHCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA